This page shows the results for a single plant selected by the user in PtRNAdb browse module. Users can further filter the results by entering keywords in the search bar on the top right corner of the output table. For further information about each entry user can click on the PtRNAdb ID. To download the results click:
| PtRNAdb ID | Plant Name | Clade | tRNA Name | tRNA Locus | tRNA Type | Anticodon | tRNA length | Infernal Score | Secondary structure score | HMM Score | Isotype Score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 67519_PtRNAdb | Ostreococcus_tauri | Algae | chr-10.trna1-Ala-TGC | chr-10 : 321326 - 321398 (+) | Ala | TGC | 73 | 57.3 | 20.20 | 37.10 | 71.5 |
| 67520_PtRNAdb | Ostreococcus_tauri | Algae | chr-10.trna2-Ala-CGC | chr-10 : 454029 - 454101 (+) | Ala | CGC | 73 | 62.5 | 19.60 | 42.90 | 86.0 |
| 67521_PtRNAdb | Ostreococcus_tauri | Algae | chr-10.trna3-Gln-TTG | chr-10 : 530118 - 529957 (-) | Gln | TTG | 72 | 53.0 | 21.00 | 32.00 | 72.3 |
| 67522_PtRNAdb | Ostreococcus_tauri | Algae | chr-11.trna1-Trp-CCA | chr-11 : 268288 - 268359 (+) | Trp | CCA | 72 | 80.4 | 28.90 | 51.50 | 78.7 |
| 67523_PtRNAdb | Ostreococcus_tauri | Algae | chr-11.trna2-Val-CAC | chr-11 : 317271 - 317344 (+) | Val | CAC | 74 | 74.0 | 31.60 | 42.40 | 87.8 |
| 67524_PtRNAdb | Ostreococcus_tauri | Algae | chr-11.trna3-Glu-TTC | chr-11 : 277230 - 277158 (-) | Glu | TTC | 73 | 69.6 | 26.60 | 43.00 | 65.1 |
| 67525_PtRNAdb | Ostreococcus_tauri | Algae | chr-14.trna1-Arg-ACG | chr-14 : 64331 - 64210 (-) | Arg | ACG | 73 | 60.3 | 23.50 | 36.80 | 91.3 |
| 67526_PtRNAdb | Ostreococcus_tauri | Algae | chr-14.trna2-Val-TAC | chr-14 : 51029 - 50956 (-) | Val | TAC | 74 | 75.8 | 23.70 | 52.10 | 96.0 |
| 67527_PtRNAdb | Ostreococcus_tauri | Algae | chr-15.trna1-Thr-CGT | chr-15 : 386057 - 385929 (-) | Thr | CGT | 74 | 56.0 | 29.80 | 26.20 | 80.4 |
| 67528_PtRNAdb | Ostreococcus_tauri | Algae | chr-15.trna2-Tyr-GTA | chr-15 : 374007 - 373881 (-) | Tyr | GTA | 73 | 56.5 | 36.00 | 20.50 | 78.4 |
| 67529_PtRNAdb | Ostreococcus_tauri | Algae | chr-15.trna3-Ser-AGA | chr-15 : 170388 - 170307 (-) | Ser | AGA | 82 | 72.1 | 36.00 | 36.10 | 95.5 |
| 67530_PtRNAdb | Ostreococcus_tauri | Algae | chr-16.trna1-Lys-CTT | chr-16 : 231069 - 230885 (-) | Lys | CTT | 73 | 73.7 | 20.70 | 53.00 | 84.7 |
| 67531_PtRNAdb | Ostreococcus_tauri | Algae | chr-16.trna2-Glu-TTC | chr-16 : 227155 - 227083 (-) | Glu | TTC | 73 | 64.0 | 17.40 | 46.60 | 64.7 |
| 67532_PtRNAdb | Ostreococcus_tauri | Algae | chr-16.trna3-Val-AAC | chr-16 : 20581 - 20508 (-) | Val | AAC | 74 | 74.0 | 31.60 | 42.40 | 87.8 |
| 67533_PtRNAdb | Ostreococcus_tauri | Algae | chr-17.trna1-Gly-GCC | chr-17 : 64365 - 64521 (+) | Gly | GCC | 71 | 59.6 | 15.40 | 44.20 | 96.3 |
| 67534_PtRNAdb | Ostreococcus_tauri | Algae | chr-17.trna2-Ile-AAT | chr-17 : 97715 - 97596 (-) | Ile | AAT | 74 | 69.6 | 27.50 | 42.10 | 103.7 |
| 67535_PtRNAdb | Ostreococcus_tauri | Algae | chr-19.trna1-Phe-GAA | chr-19 : 122858 - 122930 (+) | Phe | GAA | 73 | 79.6 | 25.00 | 54.60 | 101.6 |
| 67536_PtRNAdb | Ostreococcus_tauri | Algae | chr-1.trna1-Ala-AGC | chr-1 : 497419 - 497491 (+) | Ala | AGC | 73 | 57.3 | 19.50 | 37.80 | 85.9 |
| 67537_PtRNAdb | Ostreococcus_tauri | Algae | chr-1.trna2-Ser-GCT | chr-1 : 769314 - 769138 (-) | Ser | GCT | 82 | 56.5 | 34.00 | 22.50 | 96.5 |
| 67538_PtRNAdb | Ostreococcus_tauri | Algae | chr-20.trna1-Ile-TAT | chr-20 : 105675 - 105556 (-) | Ile | TAT | 74 | 62.0 | 24.60 | 37.40 | 88.7 |
| 67539_PtRNAdb | Ostreococcus_tauri | Algae | chr-20.trna2-Arg-TCG | chr-20 : 7988 - 7916 (-) | Arg | TCG | 73 | 76.8 | 22.20 | 54.60 | 82.6 |
| 67540_PtRNAdb | Ostreococcus_tauri | Algae | chr-2.trna1-Gly-TCC | chr-2 : 71418 - 71489 (+) | Gly | TCC | 72 | 72.9 | 25.50 | 47.40 | 81.3 |
| 67541_PtRNAdb | Ostreococcus_tauri | Algae | chr-2.trna2-Leu-CAG | chr-2 : 260348 - 260427 (+) | Leu | CAG | 80 | 67.6 | 19.50 | 48.10 | 106.4 |
| 67542_PtRNAdb | Ostreococcus_tauri | Algae | chr-2.trna3-Pro-AGG | chr-2 : 998264 - 998117 (-) | Pro | AGG | 72 | 52.8 | 35.30 | 17.50 | 89.4 |
| 67543_PtRNAdb | Ostreococcus_tauri | Algae | chr-2.trna4-Arg-CCT | chr-2 : 260263 - 260191 (-) | Arg | CCT | 73 | 73.5 | 25.20 | 48.30 | 71.4 |
| 67544_PtRNAdb | Ostreococcus_tauri | Algae | chr-2.trna5-Leu-CAA | chr-2 : 115087 - 114967 (-) | Leu | CAA | 83 | 71.5 | 32.00 | 39.50 | 103.1 |
| 67545_PtRNAdb | Ostreococcus_tauri | Algae | chr-3.trna1-Pro-TGG | chr-3 : 334036 - 334165 (+) | Pro | TGG | 72 | 58.4 | 33.10 | 25.30 | 94.6 |
| 67546_PtRNAdb | Ostreococcus_tauri | Algae | chr-4.trna1-SeC-TCA | chr-4 : 783869 - 783955 (+) | SeC | TCA | 87 | 123.5 | 0.00 | 0.00 | 123.5 |
| 67547_PtRNAdb | Ostreococcus_tauri | Algae | chr-4.trna2-Lys-TTT | chr-4 : 414359 - 414223 (-) | Lys | TTT | 73 | 66.1 | 15.90 | 50.20 | 81.8 |
| 67548_PtRNAdb | Ostreococcus_tauri | Algae | chr-6.trna1-Glu-TTC | chr-6 : 610875 - 610947 (+) | Glu | TTC | 73 | 64.0 | 17.40 | 46.60 | 64.7 |
| 67549_PtRNAdb | Ostreococcus_tauri | Algae | chr-6.trna2-Leu-AAG | chr-6 : 615441 - 615362 (-) | Leu | AAG | 80 | 64.2 | 18.50 | 45.70 | 95.1 |
| 67550_PtRNAdb | Ostreococcus_tauri | Algae | chr-6.trna3-Thr-AGT | chr-6 : 365726 - 365655 (-) | Thr | AGT | 72 | 67.1 | 31.50 | 35.60 | 85.8 |
| 67551_PtRNAdb | Ostreococcus_tauri | Algae | chr-6.trna4-Thr-TGT | chr-6 : 143428 - 143357 (-) | Thr | TGT | 72 | 80.7 | 21.10 | 59.60 | 86.8 |
| 67552_PtRNAdb | Ostreococcus_tauri | Algae | chr-7.trna1-Asp-GTC | chr-7 : 268570 - 268678 (+) | Asp | GTC | 72 | 58.6 | 31.40 | 27.20 | 83.7 |
| 67553_PtRNAdb | Ostreococcus_tauri | Algae | chr-7.trna2-Gly-CCC | chr-7 : 327180 - 327109 (-) | Gly | CCC | 72 | 67.1 | 28.20 | 38.90 | 78.8 |
| 67554_PtRNAdb | Ostreococcus_tauri | Algae | chr-7.trna3-Met-CAT | chr-7 : 219769 - 219576 (-) | Met | CAT | 74 | 57.7 | 29.60 | 28.10 | 84.6 |
| 67555_PtRNAdb | Ostreococcus_tauri | Algae | chr-8.trna1-Pro-CGG | chr-8 : 537613 - 537505 (-) | Pro | CGG | 72 | 55.4 | 36.80 | 18.60 | 104.3 |
| 67556_PtRNAdb | Ostreococcus_tauri | Algae | chr-9.trna1-iMet-CAT | chr-9 : 207721 - 207650 (-) | iMet | CAT | 72 | 64.4 | 32.90 | 31.50 | 94.2 |
| 67557_PtRNAdb | Ostreococcus_tauri | Algae | chr-9.trna2-Val-CAC | chr-9 : 51468 - 51395 (-) | Val | CAC | 74 | 74.0 | 31.60 | 42.40 | 87.8 |
| 113510_PtRNAdb | Ostreococcus_tauri | Algae | Mt.trna10-Leu-TAA | Mt : 44140 - 44220 (+) | Leu | TAA | 81 | 69.2 | 31.60 | 37.60 | n/a |
| 113511_PtRNAdb | Ostreococcus_tauri | Algae | Mt.trna11-Arg-TCT | Mt : 43767 - 43694 (-) | Arg | TCT | 74 | 67.9 | 28.30 | 39.60 | n/a |
| 113512_PtRNAdb | Ostreococcus_tauri | Algae | Mt.trna12-Pro-TGG | Mt : 43692 - 43619 (-) | Pro | TGG | 74 | 61.1 | 26.70 | 34.40 | n/a |
| 113513_PtRNAdb | Ostreococcus_tauri | Algae | Mt.trna13-Met-CAT | Mt : 37763 - 37690 (-) | Met | CAT | 74 | 67.7 | 20.70 | 47.00 | n/a |
| 113514_PtRNAdb | Ostreococcus_tauri | Algae | Mt.trna14-Gln-TTG | Mt : 33843 - 33772 (-) | Gln | TTG | 72 | 58.4 | 27.90 | 30.50 | n/a |
| 113515_PtRNAdb | Ostreococcus_tauri | Algae | Mt.trna15-Gly-GCC | Mt : 24516 - 24445 (-) | Gly | GCC | 72 | 67.7 | 21.20 | 46.50 | n/a |
| 113516_PtRNAdb | Ostreococcus_tauri | Algae | Mt.trna16-Glu-TTC | Mt : 24200 - 24129 (-) | Glu | TTC | 72 | 58.8 | 25.10 | 33.70 | n/a |
| 113517_PtRNAdb | Ostreococcus_tauri | Algae | Mt.trna17-Tyr-GTA | Mt : 12846 - 12764 (-) | Tyr | GTA | 83 | 66.9 | 16.30 | 50.60 | n/a |
| 113518_PtRNAdb | Ostreococcus_tauri | Algae | Mt.trna18-Cys-GCA | Mt : 12433 - 12363 (-) | Cys | GCA | 71 | 65.9 | 29.40 | 36.50 | n/a |
| 113519_PtRNAdb | Ostreococcus_tauri | Algae | Mt.trna19-His-GTG | Mt : 12356 - 12284 (-) | His | GTG | 73 | 66.0 | 20.50 | 45.50 | n/a |
| 113520_PtRNAdb | Ostreococcus_tauri | Algae | Mt.trna1-Leu-GAG | Mt : 6585 - 6667 (+) | Leu | GAG | 83 | 61.3 | 27.10 | 34.20 | n/a |
| 113521_PtRNAdb | Ostreococcus_tauri | Algae | Mt.trna20-Val-TAC | Mt : 8637 - 8565 (-) | Val | TAC | 73 | 65.9 | 26.20 | 39.70 | n/a |
| 113522_PtRNAdb | Ostreococcus_tauri | Algae | Mt.trna21-Asp-GTC | Mt : 8561 - 8489 (-) | Asp | GTC | 73 | 64.9 | 19.30 | 45.60 | n/a |
| 113523_PtRNAdb | Ostreococcus_tauri | Algae | Mt.trna22-Ser-GCT | Mt : 7283 - 7196 (-) | Ser | GCT | 88 | 68.1 | 24.00 | 44.10 | n/a |
| 113524_PtRNAdb | Ostreococcus_tauri | Algae | Mt.trna23-Ala-TGC | Mt : 7179 - 7107 (-) | Ala | TGC | 73 | 57.9 | 22.70 | 35.20 | n/a |
| 113525_PtRNAdb | Ostreococcus_tauri | Algae | Mt.trna24-Thr-GGT | Mt : 7104 - 7032 (-) | Thr | GGT | 73 | 47.6 | 11.50 | 36.10 | n/a |
| 113526_PtRNAdb | Ostreococcus_tauri | Algae | Mt.trna25-Leu-TAG | Mt : 1728 - 1646 (-) | Leu | TAG | 83 | 57.4 | 25.20 | 32.20 | n/a |
| 113527_PtRNAdb | Ostreococcus_tauri | Algae | Mt.trna26-Lys-TTT | Mt : 1644 - 1572 (-) | Lys | TTT | 73 | 69.6 | 22.30 | 47.30 | n/a |
| 113528_PtRNAdb | Ostreococcus_tauri | Algae | Mt.trna27-Met-CAT | Mt : 1563 - 1491 (-) | Met | CAT | 73 | 58.0 | 28.10 | 29.90 | n/a |
| 113529_PtRNAdb | Ostreococcus_tauri | Algae | Mt.trna28-Ser-TGA | Mt : 1487 - 1405 (-) | Ser | TGA | 83 | 69.5 | 20.70 | 48.80 | n/a |
| 113530_PtRNAdb | Ostreococcus_tauri | Algae | Mt.trna2-Met-CAT | Mt : 18271 - 18344 (+) | Met | CAT | 74 | 67.7 | 20.70 | 47.00 | n/a |
| 113531_PtRNAdb | Ostreococcus_tauri | Algae | Mt.trna3-Trp-CCA | Mt : 24214 - 24286 (+) | Trp | CCA | 73 | 65.6 | 26.00 | 39.60 | n/a |
| 113532_PtRNAdb | Ostreococcus_tauri | Algae | Mt.trna4-Arg-ACG | Mt : 24290 - 24363 (+) | Arg | ACG | 74 | 64.3 | 25.10 | 39.20 | n/a |
| 113533_PtRNAdb | Ostreococcus_tauri | Algae | Mt.trna5-Ile-GAT | Mt : 24371 - 24444 (+) | Ile | GAT | 74 | 71.6 | 34.50 | 37.10 | n/a |
| 113534_PtRNAdb | Ostreococcus_tauri | Algae | Mt.trna6-Asn-GTT | Mt : 26193 - 26264 (+) | Asn | GTT | 72 | 66.2 | 27.50 | 38.70 | n/a |
| 113535_PtRNAdb | Ostreococcus_tauri | Algae | Mt.trna7-Phe-GAA | Mt : 33048 - 33121 (+) | Phe | GAA | 74 | 76.4 | 27.30 | 49.10 | n/a |
| 113536_PtRNAdb | Ostreococcus_tauri | Algae | Mt.trna8-Tyr-GTA | Mt : 43188 - 43270 (+) | Tyr | GTA | 83 | 66.9 | 16.30 | 50.60 | n/a |
| 113537_PtRNAdb | Ostreococcus_tauri | Algae | Mt.trna9-Gly-TCC | Mt : 44060 - 44130 (+) | Gly | TCC | 71 | 65.6 | 28.10 | 37.50 | n/a |
| 111850_PtRNAdb | Ostreococcus_tauri | Algae | chl.trna10-Leu-TAA | chl : 49511 - 49593 (+) | Leu | TAA | 83 | 70.1 | 35.40 | 34.70 | n/a |
| 111851_PtRNAdb | Ostreococcus_tauri | Algae | chl.trna11-Gln-TTG | chl : 53884 - 53955 (+) | Gln | TTG | 72 | 57.2 | 23.70 | 33.50 | n/a |
| 111852_PtRNAdb | Ostreococcus_tauri | Algae | chl.trna12-Asp-GTC | chl : 60134 - 60207 (+) | Asp | GTC | 74 | 61.0 | 12.70 | 48.30 | n/a |
| 111853_PtRNAdb | Ostreococcus_tauri | Algae | chl.trna13-Pro-TGG | chl : 60879 - 60952 (+) | Pro | TGG | 74 | 63.1 | 28.40 | 34.70 | n/a |
| 111854_PtRNAdb | Ostreococcus_tauri | Algae | chl.trna14-Trp-CCA | chl : 60983 - 61055 (+) | Trp | CCA | 73 | 69.5 | 27.30 | 42.20 | n/a |
| 111855_PtRNAdb | Ostreococcus_tauri | Algae | chl.trna15-Ser-GCT | chl : 61102 - 61188 (+) | Ser | GCT | 87 | 69.2 | 35.40 | 33.80 | n/a |
| 111856_PtRNAdb | Ostreococcus_tauri | Algae | chl.trna16-Ser-TGA | chl : 61789 - 61873 (+) | Ser | TGA | 85 | 66.7 | 24.80 | 41.90 | n/a |
| 111857_PtRNAdb | Ostreococcus_tauri | Algae | chl.trna17-Phe-GAA | chl : 62633 - 62705 (+) | Phe | GAA | 73 | 74.4 | 26.60 | 47.80 | n/a |
| 111858_PtRNAdb | Ostreococcus_tauri | Algae | chl.trna18-Arg-ACG | chl : 71534 - 71461 (-) | Arg | ACG | 74 | 66.2 | 16.60 | 49.60 | n/a |
| 111859_PtRNAdb | Ostreococcus_tauri | Algae | chl.trna19-Ile-GAT | chl : 69705 - 69632 (-) | Ile | GAT | 74 | 70.0 | 34.20 | 35.80 | n/a |
| 111860_PtRNAdb | Ostreococcus_tauri | Algae | chl.trna1-Thr-TGT | chl : 20678 - 20750 (+) | Thr | TGT | 73 | 73.6 | 28.00 | 45.60 | n/a |
| 111861_PtRNAdb | Ostreococcus_tauri | Algae | chl.trna20-Ala-TGC | chl : 69625 - 69553 (-) | Ala | TGC | 73 | 73.5 | 25.20 | 48.30 | n/a |
| 111862_PtRNAdb | Ostreococcus_tauri | Algae | chl.trna21-Cys-GCA | chl : 26137 - 26066 (-) | Cys | GCA | 72 | 71.9 | 29.60 | 42.30 | n/a |
| 111863_PtRNAdb | Ostreococcus_tauri | Algae | chl.trna22-Asn-GTT | chl : 20557 - 20486 (-) | Asn | GTT | 72 | 75.0 | 28.60 | 46.40 | n/a |
| 111864_PtRNAdb | Ostreococcus_tauri | Algae | chl.trna23-Lys-TTT | chl : 14669 - 14598 (-) | Lys | TTT | 72 | 75.5 | 23.20 | 52.30 | n/a |
| 111865_PtRNAdb | Ostreococcus_tauri | Algae | chl.trna24-Met-CAT | chl : 5382 - 5309 (-) | Met | CAT | 74 | 61.3 | 22.30 | 39.00 | n/a |
| 111866_PtRNAdb | Ostreococcus_tauri | Algae | chl.trna25-Gly-TCC | chl : 4930 - 4859 (-) | Gly | TCC | 72 | 63.8 | 25.00 | 38.80 | n/a |
| 111867_PtRNAdb | Ostreococcus_tauri | Algae | chl.trna26-His-GTG | chl : 4789 - 4718 (-) | His | GTG | 72 | 59.8 | 18.00 | 41.80 | n/a |
| 111868_PtRNAdb | Ostreococcus_tauri | Algae | chl.trna27-Val-TAC | chl : 4448 - 4376 (-) | Val | TAC | 73 | 70.3 | 23.80 | 46.50 | n/a |
| 111869_PtRNAdb | Ostreococcus_tauri | Algae | chl.trna2-Arg-TCT | chl : 20807 - 20879 (+) | Arg | TCT | 73 | 62.3 | 26.30 | 36.00 | n/a |
| 111870_PtRNAdb | Ostreococcus_tauri | Algae | chl.trna3-Leu-TAG | chl : 22821 - 22900 (+) | Leu | TAG | 80 | 66.9 | 32.20 | 34.70 | n/a |
| 111871_PtRNAdb | Ostreococcus_tauri | Algae | chl.trna4-Glu-TTC | chl : 23009 - 23081 (+) | Glu | TTC | 73 | 49.3 | 28.30 | 21.00 | n/a |
| 111872_PtRNAdb | Ostreococcus_tauri | Algae | chl.trna5-Ile-GAT | chl : 37232 - 37305 (+) | Ile | GAT | 74 | 70.0 | 34.20 | 35.80 | n/a |
| 111873_PtRNAdb | Ostreococcus_tauri | Algae | chl.trna6-Ala-TGC | chl : 37312 - 37384 (+) | Ala | TGC | 73 | 73.5 | 25.20 | 48.30 | n/a |
| 111874_PtRNAdb | Ostreococcus_tauri | Algae | chl.trna7-Met-CAT | chl : 42770 - 42841 (+) | Met | CAT | 72 | 65.9 | 10.50 | 55.40 | n/a |
| 111875_PtRNAdb | Ostreococcus_tauri | Algae | chl.trna8-Leu-GAG | chl : 49309 - 49389 (+) | Leu | GAG | 81 | 54.2 | 30.60 | 23.60 | n/a |
| 111876_PtRNAdb | Ostreococcus_tauri | Algae | chl.trna9-Tyr-GTA | chl : 49419 - 49499 (+) | Tyr | GTA | 81 | 69.9 | 26.80 | 43.10 | n/a |
© Developed by Dr. Shailesh Laboratory | National Institute of Plant Genome Research (NIPGR), New Delhi, India | DBT
