Detailed Peptide Information
This page shows detailed information of individual peptides present in PlantPepDB database. The page is majorly divided into 3 sections. The first sections contains primary information like peptide activity, source, sequence, etc. In the secondary information section user can access the tertiary structure as well as the physico-chemical properties by clicking the respective links. Further there is also link of the source database and research article from which the peptide data is retrieved. Download the information by clicking
| Primary Information |
|---|
| PPepDB ID | PPepDB_5939 |
| Peptide Name | AMP_AMARE |
| PMID(s) | --NA-- |
| Plant Source (Scientific Name) | Amaranthus retroflexus |
| Plant Source (Common Name) | Redroot amaranth |
| Plant Family | Amaranthaceae |
| Peptide Family | --NA-- |
| Peptide Function | Signaling-peptide |
| Peptide Function Description | Antibiotic; Antimicrobial; Chitin-binding; Direct protein sequencing; Fungicide; Plant defense; Signal | Antimicrobial peptide Ar-AMP precursor. |
| Activity Against | --NA-- |
| IC50 value | --NA-- |
| Sequence | KYCGRASTTVDHQADAAAAAATKTANNPTDAKLAGAGSPMVNMKSVALIVIVMMAFMMVDPSMGAGECVQGRCPSGMCCSQFGYCGRGP |
| Sequence Length | 89 |
| Validation | Experimental evidence at protein level |
| Average Molecular Weight (Da) | 9038.51 |
| Monoisotopic Molecular Weight (Da) | 9032.13 |
| Isoelectric Point (pI) | 8.31 |
| Method / Extraction | --NA-- |
| External links (Uniprot, PDB and Source Information Database) |
|---|
| Uniprot | Q5I2B2 |
| NCBI | --NA-- |
| EMBL | AY861660 |
| Link to Source Databases | SPdb9098 |
|---|
| Addtional Information | FUNCTION:Chitin-binding protein that inhibits the growth of the fungal pathogens B.cinerea, F.culmorum, H.sativum and A.consortiale, but not that of R.solani. Induces morphological changes in the fungal pathogens F.culmorum, H.sativum and R.solani, but not in A.consortiale and B.cinerea. Has antibacterial activity against the Gram-positive bacterium B.subtilis, but lacks antibacterial activity against the Gram- negative bacterium E.coli.MASS SPECTROMETRY:Mass=3153.6; Method=MALDI; Range=26-55; Source=PubMed:16126239;SIMILARITY:Contains 1 chitin-binding type-1 domain. |
