Detailed Peptide Information
This page shows detailed information of individual peptides present in PlantPepDB database. The page is majorly divided into 3 sections. The first sections contains primary information like peptide activity, source, sequence, etc. In the secondary information section user can access the tertiary structure as well as the physico-chemical properties by clicking the respective links. Further there is also link of the source database and research article from which the peptide data is retrieved. Download the information by clicking
| Primary Information |
|---|
| PPepDB ID | PPepDB_5236 |
| Peptide Name | Y2070_ARATH |
| PMID(s) | --NA-- |
| Plant Source (Scientific Name) | Arabidopsis thaliana |
| Plant Source (Common Name) | Mouse-ear cress |
| Plant Family | Brassicaceae |
| Peptide Family | --NA-- |
| Peptide Function | Signaling-peptide |
| Peptide Function Description | Alternative splicing; Complete proteome; Glycoprotein; Signal | Putative BPI/LBP family protein At3g20270 precursor. |
| Activity Against | --NA-- |
| IC50 value | --NA-- |
| Sequence | DVQDSGENLSVARLSTILSVACSTEIVKNNLIGSLRLNDFNATMKWSKIGDWSYTYRASFFEISDHGDASVEVKGMNVRITATLVNDNGSLKIASRENDCEFQTNYVQAATSRILEALFLPYVNTRLKRGFPLPIPGDFTIKNIKIVYVNFVSVSSTLAQSNNGGHISIIVSETGLEFAKDYLIKKVITTTLPLQLPDIELQSLPKQRKIDDSAAVNLTFTGNPVLGNSSVEVDINGLFMPKGDDIKVAGMYNSWFVLKQKSNILLTILTSSLLAKFSYPSTLFFFLEMALMKVMTILVLNKVKIPLIGKVRMGLSNIQIDAVHVQSSKMETRKDGIILSVLGATANLSMSGILVCTDIGTSTNQSRSSSFFGGVNKRMVTISVEEGVFNSATLVYFNAKVMHLVMEETKNGSILSTSDWKLILPELYKHYPDNKMVLNMSVTSPPAVKITENGIDATIQLDIAFTVKNIDIHINGGASWLYQGVVDAFQKMIISTVEKTVSTKIVEKMKKLDSF |
| Sequence Length | 515 |
| Validation | Experimental evidence at transcript level |
| Average Molecular Weight (Da) | 56712.73 |
| Monoisotopic Molecular Weight (Da) | 56676.69 |
| Isoelectric Point (pI) | 8.65 |
| Method / Extraction | --NA-- |
| External links (Uniprot, PDB and Source Information Database) |
|---|
| Uniprot | Q8VYC2 |
| NCBI | --NA-- |
| EMBL | AB024036 |
| Link to Source Databases | SPdb329629 |
|---|
| Addtional Information | ALTERNATIVE PRODUCTS:Event=Alternative splicing; Named isoforms=1; Comment=A number of isoforms are produced. According to EST sequences; Name=1; IsoId=Q8VYC2-1; Sequence=Displayed;SIMILARITY:Belongs to the BPI/LBP/Plunc superfamily. BPI/LBP family.SEQUENCE CAUTION:Sequence=BAB02808.1; Type=Erroneous gene model prediction; Note=The predicted gene At3g20270 has been split into 2 genes: At3g20270 and At3g20280; |
