Detailed Peptide Information
This page shows detailed information of individual peptides present in PlantPepDB database. The page is majorly divided into 3 sections. The first sections contains primary information like peptide activity, source, sequence, etc. In the secondary information section user can access the tertiary structure as well as the physico-chemical properties by clicking the respective links. Further there is also link of the source database and research article from which the peptide data is retrieved. Download the information by clicking
| Primary Information |
|---|
| PPepDB ID | PPepDB_4910 |
| Peptide Name | PEL13_ARATH |
| PMID(s) | --NA-- |
| Plant Source (Scientific Name) | Arabidopsis thaliana |
| Plant Source (Common Name) | Mouse-ear cress |
| Plant Family | Brassicaceae |
| Peptide Family | --NA-- |
| Peptide Function | Signaling-peptide |
| Peptide Function Description | Calcium; Complete proteome; Glycoprotein; GPI-anchor; Lipoprotein; Lyase; Membrane; Metal-binding; Signal | Probable pectate lyase 13 precursor (EC 4.2.2.2) (Powdery mildew-,resistant mutant 6) (Powdery mildew susceptibility protein).Cell membrane; Lipid-anchor, GPI-anchor (Potential). |
| Activity Against | --NA-- |
| IC50 value | --NA-- |
| Sequence | CRRGYIHVVNNDFTEWKMYAIGGSGNPTINSQGNRYSAPSDPSAKEVTKRDCSIGFGHGTLGGKNGKIYVVTDSSDNNPTNPTPGTLRYGVIQEEPLWIVFSSNMLIRLKQELIINSYKTLDGRGSAVHITGNGCLTLQYVQHIIIHNLHGGTTRGSSSSSGDDSNVFQMIFGSDAPSRPRLTLLFSLLMISVLSLSTLLIYDCKPSAGFEKRGRSDGDGISIFGSQKIWVDHCSMSHCTDGLIDAVMGSLLVDQLTRNAGVFGGPRDDQGQSGNSYSPYGGDGGGGGSSGGSSGGGMDVMMLLQNFSNTIFLLCLFFTLLSATKPLNLTLPHQHPSPDSVALHVIRSVNESLARRQLSSPSSSSSSSSSSSSSSCRTGNPIDDCWRCSDADWSTNRQRLATAITISNNYFTHHDEVMLLGHDDNYAPDTGMQVTIAFNHFGQGLVQRMPRVDSKDDGEWSNWNWRTEGDLMENGAFFVASGEGMSSMYSKASSVDPKAAS |
| Sequence Length | 501 |
| Validation | Experimental evidence at protein level |
| Average Molecular Weight (Da) | 53928.99 |
| Monoisotopic Molecular Weight (Da) | 53894.91 |
| Isoelectric Point (pI) | 6 |
| Method / Extraction | --NA-- |
| External links (Uniprot, PDB and Source Information Database) |
|---|
| Uniprot | Q93Z04 |
| NCBI | --NA-- |
| EMBL | AF534079 |
| Link to Source Databases | SPdb187117 |
|---|
| Addtional Information | FUNCTION:Susceptibility factor required for infection by most powdery mildews, but not by unrelated pathogens. Exact function not known, but clearly affects cell wall composition.CATALYTIC ACTIVITY:Eliminative cleavage of (1->4)-alpha-D- galacturonan to give oligosaccharides with 4-deoxy-alpha-D-galact- 4-enuronosyl groups at their non-reducing ends.COFACTOR:Binds 1 calcium ion. Required for its activity (By similarity).TISSUE SPECIFICITY:Expressed equally in mature leaves, buds, flowers, rosettes and roots.DOMAIN:The C-terminal domain not found in other pectate lyase- like protein is required for PMR6 function since the pmr6-2 mutation confers resistance by introducing a frameshift in the mature mRNA which eliminates the C-terminal domain.MISCELLANEOUS:Pmr6 mutations are pleiotropic, indicating that PMR6 plays a unique role in normal plant growth and development.The increased resistance in mutants is not mediated by the constitutive activation of the SA-dependent or the JA/ethylene- dependent defense pathway.MISCELLANEOUS:Cell walls of mutant plants are enriched for pectins with a lower degree of esterification and an alteration in the H bonding environment of cellulose microfibrils.SIMILARITY:Belongs to the polysaccharide lyase 1 family.SEQUENCE CAUTION:Sequence=CAB41092.1; Type=Erroneous gene model prediction; |
