Detailed Peptide Information

This page shows detailed information of individual peptides present in PlantPepDB database. The page is majorly divided into 3 sections. The first sections contains primary information like peptide activity, source, sequence, etc. In the secondary information section user can access the tertiary structure as well as the physico-chemical properties by clicking the respective links. Further there is also link of the source database and research article from which the peptide data is retrieved. Download the information by clicking

Primary Information
PPepDB ID	PPepDB_4646
Peptide Name	SCP13_ARATH
PMID(s)	--NA--
Plant Source (Scientific Name)	Arabidopsis thaliana
Plant Source (Common Name)	Mouse-ear cress
Plant Family	Brassicaceae
Peptide Family	--NA--
Peptide Function	Signaling-peptide
Peptide Function Description	Alternative splicing; Carboxypeptidase; Complete proteome; Glycoprotein; Hydrolase; Protease; Secreted; Signal | Serine carboxypeptidase-like 13 precursor (EC 3.4.16.-).Secreted (Potential).
Activity Against	--NA--
IC50 value	--NA--
Sequence	ATIKGSGHTAEYKPKETSIMFKRWISAQPLEEVQLFYYFIKSEKNPEEDPLLLWLSGGPGCSSLTGLLFENGPVALKFEVGYILGNPITDTESEQNYQIPYAHGMALISDELYKSMERICKGNYVKVDSLMSLTLEFLLLLIVLILSHHAHSGSIVKFLPGFEGPLPFELETGYIGIGEENGDHDMMVPFLATQAWIRSLNYSITDDWKPWMINDQIAGYTRSYSNKMTFNTKCYKLIKDYQKCIHKLNKYHILLPDCDITSPDCFLYRYTLITFWANNKRIYEFLQKWLSKHQQFFSNPFYVGGDSYSGMIVPPLVQEIGKGNYQINLQSVREALQVNKGSIGKWVQCNYKNISYNYDIKSSVAYHMKNSIDGYRSLIYYNGSVPSLVSTTYSWTKMANIIFLDQPVGSGFSYSRTPLVDKISDTGEVK
Sequence Length	430
Validation	Experimental evidence at transcript level
Average Molecular Weight (Da)	49150.32
Monoisotopic Molecular Weight (Da)	49118.68
Isoelectric Point (pI)	6.6
Method / Extraction	--NA--

Secondary Information
Tertiary Structure and DSSP Report	Click to View Structure
Physico-Chemical Properties of peptides	Click to View Physico-Chemical Details of PPepDB_4646

External links (Uniprot, PDB and Source Information Database)
Uniprot	Q8H780
NCBI	--NA--
EMBL	AF083796
Link to Source Databases	SPdb266472
Addtional Information	FUNCTION:Probable carboxypeptidase (By similarity).ALTERNATIVE PRODUCTS:Event=Alternative splicing; Named isoforms=2; Name=1; IsoId=Q8H780-1; Sequence=Displayed; Name=2; IsoId=Q8H780-2; Sequence=VSP_022847, VSP_022848; Note=No experimental confirmation available;TISSUE SPECIFICITY:Expression not detected.SIMILARITY:Belongs to the peptidase S10 family.SEQUENCE CAUTION:Sequence=AAK95312.1; Type=Frameshift; Positions=140;