Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4646 |
| Number of amino acids: | 430 |
| Molecular Weight: | 49150.32 Da |
| Theoretical pI: | 6.6 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 14 | 3.26% |
| Cysteine CYS (C) | 7 | 1.63% |
| Glutamic Acid GLU (E) | 23 | 5.35% |
| Aspartic Acid ASP (D) | 19 | 4.42% |
| Glycine GLY (G) | 31 | 7.21% |
| Phynylalanine PHE (F) | 19 | 4.42% |
| Isoleucine ILE (I) | 35 | 8.14% |
| Histidine HIS (H) | 10 | 2.33% |
| Lysine LYS (K) | 31 | 7.21% |
| Methionine MET (M) | 11 | 2.56% |
| Leucine LEU (L) | 42 | 9.77% |
| Asparagine ASN (N) | 23 | 5.35% |
| Glutamine GLN (Q) | 16 | 3.72% |
| Proline PRO (P) | 21 | 4.88% |
| Serine SER (S) | 39 | 9.07% |
| Arginine ARG (R) | 9 | 2.09% |
| Threonine THR (T) | 21 | 4.88% |
| Tryptophan TRP (W) | 9 | 2.09% |
| Valine VAL (V) | 20 | 4.65% |
| Tyrosine TYR (Y) | 30 | 6.98% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2251 |
| Hydrogen | H | 3418 |
| Nitrogen | N | 556 |
| Oxygen | O | 644 |
| Sulphur | S | 18 |
| Formula | C2251H3418N556O644S18 |
| Total Number of Atoms: | 6887 |
| Total number of positively charged residues (ARG + LYS): | 40 |
| Total number of negatively charged residues (ASP + GLU): | 42 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 94575 Absorption 0.1% (=1 g/l) 1.924, assuming all pairs of CYS residues form cystines Ext. coefficient 94200 Absorption 0.1% (=1 g/l) 1.917, assuming all CYS residues are reduced |
| Aromaticity: | 0.135 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 38.30 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [36.05, 26.51, 20.93] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 86.5814 |
| Grand average of hydropathicity (GRAVY): | -0.23 |