Detailed Peptide Information
This page shows detailed information of individual peptides present in PlantPepDB database. The page is majorly divided into 3 sections. The first sections contains primary information like peptide activity, source, sequence, etc. In the secondary information section user can access the tertiary structure as well as the physico-chemical properties by clicking the respective links. Further there is also link of the source database and research article from which the peptide data is retrieved. Download the information by clicking
| Primary Information |
|---|
| PPepDB ID | PPepDB_4314 |
| Peptide Name | GGPP4_ARATH |
| PMID(s) | --NA-- |
| Plant Source (Scientific Name) | Arabidopsis thaliana |
| Plant Source (Common Name) | Mouse-ear cress |
| Plant Family | Brassicaceae |
| Peptide Family | --NA-- |
| Peptide Function | Signaling-peptide |
| Peptide Function Description | Carotenoid biosynthesis; Complete proteome; Endoplasmic reticulum; Isoprene biosynthesis; Multifunctional enzyme; Signal; Transferase | Geranylgeranyl pyrophosphate synthetase 4 precursor (GGPP synthetase,4) (GGPS4) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1);,Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase,(EC 2.5.1.29)].Endoplasmic reticulum. |
| Activity Against | --NA-- |
| IC50 value | --NA-- |
| Sequence | AIFARKDTREFLDSSIKLVNEEDDFGFSFDFKPYMISKAETINRALDEAIEYIHVHKTGSLLEASAVIGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDIGFDSDKVKPLIALTNFIANRNHLDETKSSEELGKTAGKDKVAGKLTYPKVIGVEKSKEFVEKLKRDAREHLQLTEADVSSKKMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLEDLMEAQNIFLYLLIVFLSLHFVFTTLKGRLSPANTRRLIRLLHIPIKSPVAAMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFEHPLIEPLNIHKAMRYAILAGGKRVRPILCLAACELVGGEERLAIQAACAVE |
| Sequence Length | 372 |
| Validation | Experimental evidence at transcript level |
| Average Molecular Weight (Da) | 40935.57 |
| Monoisotopic Molecular Weight (Da) | 40909.82 |
| Isoelectric Point (pI) | 6.89 |
| Method / Extraction | --NA-- |
| External links (Uniprot, PDB and Source Information Database) |
|---|
| Uniprot | Q9SLG2 |
| NCBI | --NA-- |
| EMBL | AC005724 |
| Link to Source Databases | SPdb94334 |
|---|
| Addtional Information | FUNCTION:Catalyzes the trans-addition of the three molecules of IPP onto DMAPP to form geranylgeranyl pyrophosphate.CATALYTIC ACTIVITY:Dimethylallyl diphosphate isopentenyl diphosphate = diphosphate geranyl diphosphate.CATALYTIC ACTIVITY:Geranyl diphosphate isopentenyl diphosphate = diphosphate trans,trans-farnesyl diphosphate.CATALYTIC ACTIVITY:Trans,trans-farnesyl diphosphate isopentenyl diphosphate = diphosphate geranylgeranyl diphosphate.PATHWAY:Isoprenoid biosynthesis; farnesyl-PP biosynthesis; farnesyl-PP from geranyl-PP and isopentenylPP:step 1/1.PATHWAY:Isoprenoid biosynthesis; geranyl-PP biosynthesis; geranyl-PP from dimethylallyl-PP and isopentenylPP:step 1/1.PATHWAY:Isoprenoid biosynthesis; geranylgeranyl-PP biosynthesis; geranylgeranyl-PP from farnesyl-PP and isopentenylPP:step 1/1.SUBUNIT:Monomer (By similarity).TISSUE SPECIFICITY:Faintly expressed in flowers.SIMILARITY:Belongs to the FPP/GGPP synthetase family. |
