Detailed Peptide Information
This page shows detailed information of individual peptides present in PlantPepDB database. The page is majorly divided into 3 sections. The first sections contains primary information like peptide activity, source, sequence, etc. In the secondary information section user can access the tertiary structure as well as the physico-chemical properties by clicking the respective links. Further there is also link of the source database and research article from which the peptide data is retrieved. Download the information by clicking
| Primary Information |
|---|
| PPepDB ID | PPepDB_4157 |
| Peptide Name | SRF1_ARATH |
| PMID(s) | --NA-- |
| Plant Source (Scientific Name) | Arabidopsis thaliana |
| Plant Source (Common Name) | Mouse-ear cress |
| Plant Family | Brassicaceae |
| Peptide Family | --NA-- |
| Peptide Function | Signaling-peptide |
| Peptide Function Description | Alternative splicing; Complete proteome; Glycoprotein; Leucine-rich repeat; Membrane; Receptor; Repeat; Signal; Transmembrane | Protein STRUBBELIG-RECEPTOR FAMILY 1 precursor (Leucine-rich repeat,receptor kinase-like protein SRF1).Membrane; Single-pass membrane protein (Potential). |
| Activity Against | --NA-- |
| IC50 value | --NA-- |
| Sequence | AERSVGSESKQESHEIDMNGNAMDLMHPSSIPPIKRVIAKATEPAEASLKAPEFEYGIYTMKCDVYSFGVVMLELLTGRKSYDKKRDRGEQFLVRWAIPQDLSDMIQREHRRNDSNGDNQYTGRRKLFAVRKLDKKSPNHEEEGKFLELVNNIDRIRHANIVQLVGFCSEHSQRLLHDIDALAKMVDPSLKGDYPAKSLSHFADVISRCVQSEPEYRPLMSEVVQLIHEYCRNGTLHDLLHIDDRLKIELSWNVRVRIALEAAKALEYLHEICDPLQNNHLSGELDVLQDLPLKDLNVENNLFNGPIPEKLLSIPNFIKGGNLFNMRSMRSGRDNNICFLGFLSFALISLPSLSLALTNPDDVAAINSLFLALESMSLNNNLLSGKIPDVFQDLGLMINIDLSSNNLSGPLPPSMQNLSTLTSLLPLLPGWVASGGDPCGESWQGVLCNASQVETIILISANLGGELGVGLNMFTPSIHRNFKSANILLDDDIRVHVSDCGLAPLISSGAVSQLSGQLLAAYGYGPTPQGKEDSFTSKRIIWISILGAFSFVVLALVCLLCGRKCLRKREDSEQLRTTSKSHGPLTAVKHFTVASLQQHTNSFSHENLIGTGMLGSVYRAELPGGSKPHLTSEYGRAREGSRSNASMLPPSNTFNKDKEARPKERVGGASKLHGGSLKAMDFSNNHIGGSIPSTLPVSLQNLFLSGNNFTGTIPESLSSLKSLSVVTIAPSPSPETPPSPTSPKRPFFGPPSPNASAGHGQAHVRSPPSDHHPSR |
| Sequence Length | 775 |
| Validation | Experimental evidence at protein level |
| Average Molecular Weight (Da) | 84823.57 |
| Monoisotopic Molecular Weight (Da) | 84770.29 |
| Isoelectric Point (pI) | 6.73 |
| Method / Extraction | --NA-- |
| External links (Uniprot, PDB and Source Information Database) |
|---|
| Uniprot | Q06BH3 |
| NCBI | --NA-- |
| EMBL | DQ914917 |
| Link to Source Databases | SPdb275500 |
|---|
| Addtional Information | FUNCTION:Not essential for epidermal patterning and not redundant with STRUBBELIG.ALTERNATIVE PRODUCTS:Event=Alternative splicing; Named isoforms=2; Comment=Alternative splicing was observed in all tissues; Name=A; IsoId=Q06BH3-1; Sequence=Displayed; Name=B; IsoId=Q06BH3-2; Sequence=VSP_029608, VSP_029609; Note=Variant in position: 397:S->N (in strain: cv. Landsberg erecta). Variant in position: 404:S->P (in strain: cv. Landsberg erecta). Variant in position: 416:D->N (in strain: cv. Landsberg erecta);TISSUE SPECIFICITY:Expressed in roots, stems, leaves and flowers.Low expression in seedlings and siliques.DOMAIN:The protein kinase domain is predicted to be catalytically inactive.MISCELLANEOUS:Over-expression of SRF1B induces no obvious phenotypes while over-expression of SRF1A may lead to seedling lethality in both cv. Landsberg and cv. Columbia.MISCELLANEOUS:Loss-of-function mutant srf1-1 (T-DNA insertion) does not show root phenotype alteration.SIMILARITY:Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.SIMILARITY:Contains 5 LRR (leucine-rich) repeats.SIMILARITY:Contains 1 protein kinase domain. |
