Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4157 |
| Number of amino acids: | 775 |
| Molecular Weight: | 84823.57 Da |
| Theoretical pI: | 6.73 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 45 | 5.81% |
| Cysteine CYS (C) | 12 | 1.55% |
| Glutamic Acid GLU (E) | 42 | 5.42% |
| Aspartic Acid ASP (D) | 39 | 5.03% |
| Glycine GLY (G) | 57 | 7.35% |
| Phynylalanine PHE (F) | 28 | 3.61% |
| Isoleucine ILE (I) | 42 | 5.42% |
| Histidine HIS (H) | 26 | 3.35% |
| Lysine LYS (K) | 37 | 4.77% |
| Methionine MET (M) | 17 | 2.19% |
| Leucine LEU (L) | 97 | 12.52% |
| Asparagine ASN (N) | 47 | 6.06% |
| Glutamine GLN (Q) | 23 | 2.97% |
| Proline PRO (P) | 52 | 6.71% |
| Serine SER (S) | 88 | 11.35% |
| Arginine ARG (R) | 40 | 5.16% |
| Threonine THR (T) | 26 | 3.35% |
| Tryptophan TRP (W) | 5 | 0.65% |
| Valine VAL (V) | 39 | 5.03% |
| Tyrosine TYR (Y) | 13 | 1.68% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3738 |
| Hydrogen | H | 5957 |
| Nitrogen | N | 1059 |
| Oxygen | O | 1135 |
| Sulphur | S | 29 |
| Formula | C3738H5957N1059O1135S29 |
| Total Number of Atoms: | 11918 |
| Total number of positively charged residues (ARG + LYS): | 77 |
| Total number of negatively charged residues (ASP + GLU): | 81 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 47620 Absorption 0.1% (=1 g/l) 0.561, assuming all pairs of CYS residues form cystines Ext. coefficient 46870 Absorption 0.1% (=1 g/l) 0.553, assuming all CYS residues are reduced |
| Aromaticity: | 0.059 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 45.05 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.90, 31.48, 25.94] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 90.3483 |
| Grand average of hydropathicity (GRAVY): | -0.27 |