Detailed Peptide Information
This page shows detailed information of individual peptides present in PlantPepDB database. The page is majorly divided into 3 sections. The first sections contains primary information like peptide activity, source, sequence, etc. In the secondary information section user can access the tertiary structure as well as the physico-chemical properties by clicking the respective links. Further there is also link of the source database and research article from which the peptide data is retrieved. Download the information by clicking
| Primary Information |
|---|
| PPepDB ID | PPepDB_3342 |
| Peptide Name | StAsp-PSI |
| PMID(s) | 20153392 |
| Plant Source (Scientific Name) | Solanum tuberosum |
| Plant Source (Common Name) | Potato |
| Plant Family | Solanaceae |
| Peptide Family | --NA-- |
| Peptide Function | Antimicrobial, Cytotoxic |
| Peptide Function Description | It is used to kill spores of two potato pathogens in a dose-dependent manner without any deleterious effect on plant cells, i.e. it has the ability to kill microbial pathogens on the direct interaction of the protein with the microbial cell wall/or membrane, leading to increased permeability and lysis. It is also cytotoxic to Gram-negative and Gram-positive bacteria and shows cytotoxic activity. |
| Activity Against | P. infestans (IC50= 0.2-0.3 µM), F. solani (IC50= 1.25 µM) |
| IC50 value | 0.2-0.3 µM | 1.25 µM |
| Sequence | IVSMECKTIVSQYGEMIWDLLVSGVRPDQVCSQAGLCFVDGAQHVSSNIKTVVERETEGSSVGEAPLCTACEMAVVWMQNQLKQEGTKEKVIEYVNQLCEKIPSP |
| Sequence Length | 105 |
| Validation | Experimental evidence at protein level |
| Average Molecular Weight (Da) | 11537.25 |
| Monoisotopic Molecular Weight (Da) | 11529.6 |
| Isoelectric Point (pI) | 4.63 |
| Method / Extraction | Affinity chromatography using a Ni-NTA column |
| External links (Uniprot, PDB and Source Information Database) |
|---|
| Uniprot | --NA-- |
| NCBI | --NA-- |
| EMBL | --NA-- |
| Link to Source Databases | --NA-- |
|---|
| Addtional Information | StAsp-PSI are cytotoxic to Gram-negative and Gram-positive bacteria in a dose dependent manner |
