Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_3342 |
| Number of amino acids: | 105 |
| Molecular Weight: | 11537.25 Da |
| Theoretical pI: | 4.63 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 5 | 4.76% |
| Cysteine CYS (C) | 6 | 5.71% |
| Glutamic Acid GLU (E) | 11 | 10.48% |
| Aspartic Acid ASP (D) | 3 | 2.86% |
| Glycine GLY (G) | 7 | 6.67% |
| Phynylalanine PHE (F) | 1 | 0.95% |
| Isoleucine ILE (I) | 6 | 5.71% |
| Histidine HIS (H) | 1 | 0.95% |
| Lysine LYS (K) | 6 | 5.71% |
| Methionine MET (M) | 4 | 3.81% |
| Leucine LEU (L) | 6 | 5.71% |
| Asparagine ASN (N) | 3 | 2.86% |
| Glutamine GLN (Q) | 8 | 7.62% |
| Proline PRO (P) | 4 | 3.81% |
| Serine SER (S) | 9 | 8.57% |
| Arginine ARG (R) | 2 | 1.9% |
| Threonine THR (T) | 5 | 4.76% |
| Tryptophan TRP (W) | 2 | 1.9% |
| Valine VAL (V) | 14 | 13.33% |
| Tyrosine TYR (Y) | 2 | 1.9% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 498 |
| Hydrogen | H | 804 |
| Nitrogen | N | 132 |
| Oxygen | O | 161 |
| Sulphur | S | 10 |
| Formula | C498H804N132O161S10 |
| Total Number of Atoms: | 1605 |
| Total number of positively charged residues (ARG + LYS): | 8 |
| Total number of negatively charged residues (ASP + GLU): | 14 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 14355 Absorption 0.1% (=1 g/l) 1.244, assuming all pairs of CYS residues form cystines Ext. coefficient 13980 Absorption 0.1% (=1 g/l) 1.212, assuming all CYS residues are reduced |
| Aromaticity: | 0.048 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 40.59 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [29.52, 21.90, 24.76] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 87.9999 |
| Grand average of hydropathicity (GRAVY): | -0.04 |