tRNA Gene List

This page shows the results for a single plant selected by the user in PtRNAdb browse module. Users can further filter the results by entering keywords in the search bar on the top right corner of the output table. For further information about each entry user can click on the PtRNAdb ID. To download the results click:

PtRNAdb ID	Plant Name	Clade	tRNA Name	tRNA Locus	tRNA Type	Anticodon	tRNA length	Infernal Score	Secondary structure score	HMM Score	Isotype Score
12808_PtRNAdb	Bathycoccus_prasinos	Algae	chr-10.trna1-iMet-CAT	chr-10 : 622212 - 622283 (+)	iMet	CAT	72	56.9	36.80	20.10	97.6
12809_PtRNAdb	Bathycoccus_prasinos	Algae	chr-12.trna1-Pro-TGG	chr-12 : 558175 - 558289 (+)	Pro	TGG	72	55.0	34.10	20.90	103.1
12810_PtRNAdb	Bathycoccus_prasinos	Algae	chr-13.trna1-Val-CAC	chr-13 : 380990 - 381098 (+)	Val	CAC	73	56.4	32.10	24.30	77.5
12811_PtRNAdb	Bathycoccus_prasinos	Algae	chr-13.trna2-Glu-TTC	chr-13 : 423537 - 423624 (+)	Glu	TTC	73	52.0	19.70	32.30	66.8
12812_PtRNAdb	Bathycoccus_prasinos	Algae	chr-13.trna3-Trp-CCA	chr-13 : 420245 - 420135 (-)	Trp	CCA	73	65.1	17.20	47.90	70.2
12813_PtRNAdb	Bathycoccus_prasinos	Algae	chr-14.trna1-Leu-CAA	chr-14 : 370770 - 370883 (+)	Leu	CAA	83	67.6	27.90	39.70	106.1
12814_PtRNAdb	Bathycoccus_prasinos	Algae	chr-14.trna2-Phe-GAA	chr-14 : 468811 - 468739 (-)	Phe	GAA	73	81.4	23.90	57.50	103.0
12815_PtRNAdb	Bathycoccus_prasinos	Algae	chr-14.trna3-Gly-TCC	chr-14 : 463437 - 463366 (-)	Gly	TCC	72	68.9	20.30	48.60	74.8
12816_PtRNAdb	Bathycoccus_prasinos	Algae	chr-15.trna1-Val-AAC	chr-15 : 148319 - 148407 (+)	Val	AAC	74	64.4	32.30	32.10	92.0
12817_PtRNAdb	Bathycoccus_prasinos	Algae	chr-16.trna1-Lys-CTT	chr-16 : 195357 - 195285 (-)	Lys	CTT	73	87.1	18.30	68.80	80.8
12818_PtRNAdb	Bathycoccus_prasinos	Algae	chr-1.trna1-Pro-CGG	chr-1 : 1251725 - 1251823 (+)	Pro	CGG	72	51.9	36.90	15.00	94.6
12819_PtRNAdb	Bathycoccus_prasinos	Algae	chr-2.trna1-Leu-TAG	chr-2 : 134486 - 134566 (+)	Leu	TAG	81	66.2	33.40	32.80	91.7
12820_PtRNAdb	Bathycoccus_prasinos	Algae	chr-2.trna2-Cys-GCA	chr-2 : 223457 - 223528 (+)	Cys	GCA	72	66.6	24.00	42.60	84.9
12821_PtRNAdb	Bathycoccus_prasinos	Algae	chr-2.trna4-Tyr-GTA	chr-2 : 124039 - 123928 (-)	Tyr	GTA	73	60.8	17.50	43.30	68.0
12822_PtRNAdb	Bathycoccus_prasinos	Algae	chr-4.trna1-Val-TAC	chr-4 : 947654 - 947726 (+)	Val	TAC	73	66.7	33.00	33.70	74.5
12823_PtRNAdb	Bathycoccus_prasinos	Algae	chr-5.trna1-Thr-AGT	chr-5 : 407852 - 407924 (+)	Thr	AGT	73	78.8	27.90	50.90	92.3
12824_PtRNAdb	Bathycoccus_prasinos	Algae	chr-5.trna2-Leu-AAG	chr-5 : 765846 - 765992 (+)	Leu	AAG	147	31.4	15.50	15.90	30.8
12825_PtRNAdb	Bathycoccus_prasinos	Algae	chr-6.trna1-Pro-AGG	chr-6 : 70376 - 70447 (+)	Pro	AGG	72	57.9	32.10	25.80	85.9
12826_PtRNAdb	Bathycoccus_prasinos	Algae	chr-6.trna2-Arg-ACG	chr-6 : 679697 - 679769 (+)	Arg	ACG	73	69.3	28.90	40.40	78.8
12827_PtRNAdb	Bathycoccus_prasinos	Algae	chr-6.trna3-Ser-GCT	chr-6 : 449857 - 449672 (-)	Ser	GCT	82	62.2	21.10	41.10	88.1
12828_PtRNAdb	Bathycoccus_prasinos	Algae	chr-6.trna4-Leu-CAG	chr-6 : 197599 - 197520 (-)	Leu	CAG	80	72.7	22.80	49.90	110.9
12829_PtRNAdb	Bathycoccus_prasinos	Algae	chr-8.trna1-SeC-TCA	chr-8 : 779657 - 779743 (+)	SeC	TCA	87	110.1	0.00	0.00	110.1
12830_PtRNAdb	Bathycoccus_prasinos	Algae	chr-8.trna2-Ala-AGC	chr-8 : 305161 - 305089 (-)	Ala	AGC	73	62.2	23.70	38.50	81.4
12831_PtRNAdb	Bathycoccus_prasinos	Algae	chr-9.trna1-Arg-TCT	chr-9 : 844734 - 844806 (+)	Arg	TCT	73	70.2	34.50	35.70	82.7
112868_PtRNAdb	Bathycoccus_prasinos	Algae	Mt.trna10-Ser-GCT	Mt : 25199 - 25285 (+)	Ser	GCT	87	63.5	16.90	46.60	n/a
112869_PtRNAdb	Bathycoccus_prasinos	Algae	Mt.trna11-Ala-TGC	Mt : 25320 - 25392 (+)	Ala	TGC	73	65.7	22.80	42.90	n/a
112870_PtRNAdb	Bathycoccus_prasinos	Algae	Mt.trna12-Leu-TAG	Mt : 31045 - 31127 (+)	Leu	TAG	83	61.9	29.60	32.30	n/a
112871_PtRNAdb	Bathycoccus_prasinos	Algae	Mt.trna13-Lys-TTT	Mt : 31133 - 31205 (+)	Lys	TTT	73	71.3	17.80	53.50	n/a
112872_PtRNAdb	Bathycoccus_prasinos	Algae	Mt.trna14-Met-CAT	Mt : 31215 - 31287 (+)	Met	CAT	73	67.4	30.70	36.70	n/a
112873_PtRNAdb	Bathycoccus_prasinos	Algae	Mt.trna15-Ser-TGA	Mt : 31314 - 31397 (+)	Ser	TGA	84	61.9	18.10	43.80	n/a
112874_PtRNAdb	Bathycoccus_prasinos	Algae	Mt.trna16-Arg-TCT	Mt : 33390 - 33463 (+)	Arg	TCT	74	67.8	24.40	43.40	n/a
112875_PtRNAdb	Bathycoccus_prasinos	Algae	Mt.trna17-Pro-TGG	Mt : 33477 - 33550 (+)	Pro	TGG	74	65.9	26.50	39.40	n/a
112876_PtRNAdb	Bathycoccus_prasinos	Algae	Mt.trna18-Met-CAT	Mt : 39607 - 39680 (+)	Met	CAT	74	67.6	20.50	47.10	n/a
112877_PtRNAdb	Bathycoccus_prasinos	Algae	Mt.trna19-Tyr-GTA	Mt : 34042 - 33960 (-)	Tyr	GTA	83	78.8	27.50	51.30	n/a
112878_PtRNAdb	Bathycoccus_prasinos	Algae	Mt.trna1-Trp-CCA	Mt : 2077 - 2149 (+)	Trp	CCA	73	59.2	20.40	38.80	n/a
112879_PtRNAdb	Bathycoccus_prasinos	Algae	Mt.trna20-Cys-GCA	Mt : 33956 - 33886 (-)	Cys	GCA	71	43.2	2.60	40.60	n/a
112880_PtRNAdb	Bathycoccus_prasinos	Algae	Mt.trna21-Gly-TCC	Mt : 33082 - 33012 (-)	Gly	TCC	71	61.2	21.80	39.40	n/a
112881_PtRNAdb	Bathycoccus_prasinos	Algae	Mt.trna22-Leu-TAA	Mt : 33006 - 32925 (-)	Leu	TAA	82	64.8	31.80	33.00	n/a
112882_PtRNAdb	Bathycoccus_prasinos	Algae	Mt.trna23-Leu-GAG	Mt : 25878 - 25795 (-)	Leu	GAG	84	51.0	22.80	28.20	n/a
112883_PtRNAdb	Bathycoccus_prasinos	Algae	Mt.trna24-Met-CAT	Mt : 15835 - 15762 (-)	Met	CAT	74	67.6	20.50	47.10	n/a
112884_PtRNAdb	Bathycoccus_prasinos	Algae	Mt.trna25-Gln-TTG	Mt : 11828 - 11757 (-)	Gln	TTG	72	65.3	28.50	36.80	n/a
112885_PtRNAdb	Bathycoccus_prasinos	Algae	Mt.trna26-Phe-GAA	Mt : 11083 - 11010 (-)	Phe	GAA	74	74.3	26.20	48.10	n/a
112886_PtRNAdb	Bathycoccus_prasinos	Algae	Mt.trna27-Glu-TTC	Mt : 2072 - 2001 (-)	Glu	TTC	72	57.0	19.00	38.00	n/a
112887_PtRNAdb	Bathycoccus_prasinos	Algae	Mt.trna2-Arg-ACG	Mt : 2159 - 2232 (+)	Arg	ACG	74	55.5	21.90	33.60	n/a
112888_PtRNAdb	Bathycoccus_prasinos	Algae	Mt.trna3-Ile-GAT	Mt : 2239 - 2312 (+)	Ile	GAT	74	72.5	32.20	40.30	n/a
112889_PtRNAdb	Bathycoccus_prasinos	Algae	Mt.trna4-Asn-GTT	Mt : 4072 - 4144 (+)	Asn	GTT	73	70.8	30.50	40.30	n/a
112890_PtRNAdb	Bathycoccus_prasinos	Algae	Mt.trna5-Tyr-GTA	Mt : 21400 - 21482 (+)	Tyr	GTA	83	78.8	27.50	51.30	n/a
112891_PtRNAdb	Bathycoccus_prasinos	Algae	Mt.trna6-Cys-GCA	Mt : 21486 - 21556 (+)	Cys	GCA	71	59.9	21.40	38.50	n/a
112892_PtRNAdb	Bathycoccus_prasinos	Algae	Mt.trna7-His-GTG	Mt : 21562 - 21634 (+)	His	GTG	73	67.0	25.10	41.90	n/a
112893_PtRNAdb	Bathycoccus_prasinos	Algae	Mt.trna8-Val-TAC	Mt : 23796 - 23868 (+)	Val	TAC	73	65.1	24.20	40.90	n/a
112894_PtRNAdb	Bathycoccus_prasinos	Algae	Mt.trna9-Asp-GTC	Mt : 23878 - 23951 (+)	Asp	GTC	74	67.4	19.60	47.80	n/a
110165_PtRNAdb	Bathycoccus_prasinos	Algae	chl.trna10-Ile-GAT	chl : 57634 - 57553 (-)	Ile	GAT	82	17.1	17.10	0.00	n/a
110166_PtRNAdb	Bathycoccus_prasinos	Algae	chl.trna11-Ala-TGC	chl : 57547 - 57475 (-)	Ala	TGC	73	64.9	17.40	47.50	n/a
110167_PtRNAdb	Bathycoccus_prasinos	Algae	chl.trna12-Met-CAT	chl : 51466 - 51395 (-)	Met	CAT	72	65.9	10.50	55.40	n/a
110168_PtRNAdb	Bathycoccus_prasinos	Algae	chl.trna13-Leu-GAG	chl : 44556 - 44476 (-)	Leu	GAG	81	54.2	30.60	23.60	n/a
110169_PtRNAdb	Bathycoccus_prasinos	Algae	chl.trna14-Tyr-GTA	chl : 44444 - 44363 (-)	Tyr	GTA	82	69.9	28.30	41.60	n/a
110170_PtRNAdb	Bathycoccus_prasinos	Algae	chl.trna15-Leu-TAA	chl : 44349 - 44267 (-)	Leu	TAA	83	71.6	38.10	33.50	n/a
110171_PtRNAdb	Bathycoccus_prasinos	Algae	chl.trna1-Cys-GCA	chl : 9234 - 9305 (+)	Cys	GCA	72	70.7	30.80	39.90	n/a
110172_PtRNAdb	Bathycoccus_prasinos	Algae	chl.trna2-Asp-GTC	chl : 20329 - 20402 (+)	Asp	GTC	74	68.4	20.00	48.40	n/a
110173_PtRNAdb	Bathycoccus_prasinos	Algae	chl.trna3-Pro-TGG	chl : 21208 - 21281 (+)	Pro	TGG	74	64.8	28.00	36.80	n/a
110174_PtRNAdb	Bathycoccus_prasinos	Algae	chl.trna4-Trp-CCA	chl : 21334 - 21406 (+)	Trp	CCA	73	68.1	22.10	46.00	n/a
110175_PtRNAdb	Bathycoccus_prasinos	Algae	chl.trna5-Ser-GCT	chl : 21460 - 21546 (+)	Ser	GCT	87	73.4	35.50	37.90	n/a
110176_PtRNAdb	Bathycoccus_prasinos	Algae	chl.trna6-Ser-TGA	chl : 22229 - 22313 (+)	Ser	TGA	85	61.4	23.80	37.60	n/a
110177_PtRNAdb	Bathycoccus_prasinos	Algae	chl.trna7-Lys-TTT	chl : 25189 - 25260 (+)	Lys	TTT	72	72.0	21.50	50.50	n/a
110178_PtRNAdb	Bathycoccus_prasinos	Algae	chl.trna8-Phe-GAA	chl : 32399 - 32471 (+)	Phe	GAA	73	74.4	26.60	47.80	n/a
110179_PtRNAdb	Bathycoccus_prasinos	Algae	chl.trna9-Arg-ACG	chl : 59922 - 59849 (-)	Arg	ACG	74	55.4	19.90	35.50	n/a