Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_993 |
| Number of amino acids: | 232 |
| Molecular Weight: | 24704.16 Da |
| Theoretical pI: | 8.97 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 22 | 9.48% |
| Cysteine CYS (C) | 16 | 6.9% |
| Glutamic Acid GLU (E) | 3 | 1.29% |
| Aspartic Acid ASP (D) | 7 | 3.02% |
| Glycine GLY (G) | 24 | 10.34% |
| Phynylalanine PHE (F) | 9 | 3.88% |
| Isoleucine ILE (I) | 8 | 3.45% |
| Histidine HIS (H) | 0 | 0% |
| Lysine LYS (K) | 15 | 6.47% |
| Methionine MET (M) | 2 | 0.86% |
| Leucine LEU (L) | 16 | 6.9% |
| Asparagine ASN (N) | 17 | 7.33% |
| Glutamine GLN (Q) | 8 | 3.45% |
| Proline PRO (P) | 10 | 4.31% |
| Serine SER (S) | 16 | 6.9% |
| Arginine ARG (R) | 6 | 2.59% |
| Threonine THR (T) | 24 | 10.34% |
| Tryptophan TRP (W) | 4 | 1.72% |
| Valine VAL (V) | 13 | 5.6% |
| Tyrosine TYR (Y) | 12 | 5.17% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1085 |
| Hydrogen | H | 1684 |
| Nitrogen | N | 294 |
| Oxygen | O | 330 |
| Sulphur | S | 18 |
| Formula | C1085H1684N294O330S18 |
| Total Number of Atoms: | 3411 |
| Total number of positively charged residues (ARG + LYS): | 21 |
| Total number of negatively charged residues (ASP + GLU): | 10 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 40880 Absorption 0.1% (=1 g/l) 1.655, assuming all pairs of CYS residues form cystines Ext. coefficient 39880 Absorption 0.1% (=1 g/l) 1.614, assuming all CYS residues are reduced |
| Aromaticity: | 0.108 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 21.39 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [26.72, 28.88, 18.53] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 66.0776 |
| Grand average of hydropathicity (GRAVY): | -0.10 |