Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_985 |
| Number of amino acids: | 251 |
| Molecular Weight: | 27188.02 Da |
| Theoretical pI: | 7.87 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 20 | 7.97% |
| Cysteine CYS (C) | 18 | 7.17% |
| Glutamic Acid GLU (E) | 8 | 3.19% |
| Aspartic Acid ASP (D) | 6 | 2.39% |
| Glycine GLY (G) | 19 | 7.57% |
| Phynylalanine PHE (F) | 13 | 5.18% |
| Isoleucine ILE (I) | 8 | 3.19% |
| Histidine HIS (H) | 15 | 5.98% |
| Lysine LYS (K) | 6 | 2.39% |
| Methionine MET (M) | 4 | 1.59% |
| Leucine LEU (L) | 21 | 8.37% |
| Asparagine ASN (N) | 14 | 5.58% |
| Glutamine GLN (Q) | 5 | 1.99% |
| Proline PRO (P) | 18 | 7.17% |
| Serine SER (S) | 20 | 7.97% |
| Arginine ARG (R) | 10 | 3.98% |
| Threonine THR (T) | 22 | 8.76% |
| Tryptophan TRP (W) | 3 | 1.2% |
| Valine VAL (V) | 15 | 5.98% |
| Tyrosine TYR (Y) | 6 | 2.39% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1194 |
| Hydrogen | H | 1827 |
| Nitrogen | N | 339 |
| Oxygen | O | 347 |
| Sulphur | S | 22 |
| Formula | C1194H1827N339O347S22 |
| Total Number of Atoms: | 3729 |
| Total number of positively charged residues (ARG + LYS): | 16 |
| Total number of negatively charged residues (ASP + GLU): | 14 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 26565 Absorption 0.1% (=1 g/l) 0.977, assuming all pairs of CYS residues form cystines Ext. coefficient 25440 Absorption 0.1% (=1 g/l) 0.936, assuming all CYS residues are reduced |
| Aromaticity: | 0.088 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 60.56 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [26.29, 28.29, 21.12] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 70.3586 |
| Grand average of hydropathicity (GRAVY): | -0.03 |