Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_962 |
| Number of amino acids: | 243 |
| Molecular Weight: | 26123.09 Da |
| Theoretical pI: | 9.28 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 23 | 9.47% |
| Cysteine CYS (C) | 16 | 6.58% |
| Glutamic Acid GLU (E) | 2 | 0.82% |
| Aspartic Acid ASP (D) | 8 | 3.29% |
| Glycine GLY (G) | 25 | 10.29% |
| Phynylalanine PHE (F) | 12 | 4.94% |
| Isoleucine ILE (I) | 9 | 3.7% |
| Histidine HIS (H) | 3 | 1.23% |
| Lysine LYS (K) | 11 | 4.53% |
| Methionine MET (M) | 4 | 1.65% |
| Leucine LEU (L) | 21 | 8.64% |
| Asparagine ASN (N) | 12 | 4.94% |
| Glutamine GLN (Q) | 8 | 3.29% |
| Proline PRO (P) | 16 | 6.58% |
| Serine SER (S) | 22 | 9.05% |
| Arginine ARG (R) | 14 | 5.76% |
| Threonine THR (T) | 12 | 4.94% |
| Tryptophan TRP (W) | 3 | 1.23% |
| Valine VAL (V) | 11 | 4.53% |
| Tyrosine TYR (Y) | 11 | 4.53% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1154 |
| Hydrogen | H | 1791 |
| Nitrogen | N | 325 |
| Oxygen | O | 329 |
| Sulphur | S | 20 |
| Formula | C1154H1791N325O329S20 |
| Total Number of Atoms: | 3619 |
| Total number of positively charged residues (ARG + LYS): | 25 |
| Total number of negatively charged residues (ASP + GLU): | 10 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 33890 Absorption 0.1% (=1 g/l) 1.297, assuming all pairs of CYS residues form cystines Ext. coefficient 32890 Absorption 0.1% (=1 g/l) 1.259, assuming all CYS residues are reduced |
| Aromaticity: | 0.107 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 55.70 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [27.57, 30.86, 20.58] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 70.7407 |
| Grand average of hydropathicity (GRAVY): | -0.04 |