Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_941 |
| Number of amino acids: | 240 |
| Molecular Weight: | 24652.56 Da |
| Theoretical pI: | 4.83 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 24 | 10% |
| Cysteine CYS (C) | 17 | 7.08% |
| Glutamic Acid GLU (E) | 4 | 1.67% |
| Aspartic Acid ASP (D) | 13 | 5.42% |
| Glycine GLY (G) | 26 | 10.83% |
| Phynylalanine PHE (F) | 11 | 4.58% |
| Isoleucine ILE (I) | 4 | 1.67% |
| Histidine HIS (H) | 1 | 0.42% |
| Lysine LYS (K) | 6 | 2.5% |
| Methionine MET (M) | 3 | 1.25% |
| Leucine LEU (L) | 16 | 6.67% |
| Asparagine ASN (N) | 6 | 2.5% |
| Glutamine GLN (Q) | 5 | 2.08% |
| Proline PRO (P) | 12 | 5% |
| Serine SER (S) | 33 | 13.75% |
| Arginine ARG (R) | 7 | 2.92% |
| Threonine THR (T) | 24 | 10% |
| Tryptophan TRP (W) | 3 | 1.25% |
| Valine VAL (V) | 16 | 6.67% |
| Tyrosine TYR (Y) | 9 | 3.75% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1063 |
| Hydrogen | H | 1635 |
| Nitrogen | N | 283 |
| Oxygen | O | 352 |
| Sulphur | S | 20 |
| Formula | C1063H1635N283O352S20 |
| Total Number of Atoms: | 3353 |
| Total number of positively charged residues (ARG + LYS): | 13 |
| Total number of negatively charged residues (ASP + GLU): | 17 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 30910 Absorption 0.1% (=1 g/l) 1.254, assuming all pairs of CYS residues form cystines Ext. coefficient 29910 Absorption 0.1% (=1 g/l) 1.213, assuming all CYS residues are reduced |
| Aromaticity: | 0.096 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 43.07 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [24.58, 32.08, 19.58] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 61.8334 |
| Grand average of hydropathicity (GRAVY): | 0.10 |