Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_854 |
| Number of amino acids: | 245 |
| Molecular Weight: | 25371.47 Da |
| Theoretical pI: | 4.94 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 22 | 8.98% |
| Cysteine CYS (C) | 16 | 6.53% |
| Glutamic Acid GLU (E) | 4 | 1.63% |
| Aspartic Acid ASP (D) | 11 | 4.49% |
| Glycine GLY (G) | 29 | 11.84% |
| Phynylalanine PHE (F) | 15 | 6.12% |
| Isoleucine ILE (I) | 11 | 4.49% |
| Histidine HIS (H) | 3 | 1.22% |
| Lysine LYS (K) | 7 | 2.86% |
| Methionine MET (M) | 5 | 2.04% |
| Leucine LEU (L) | 11 | 4.49% |
| Asparagine ASN (N) | 10 | 4.08% |
| Glutamine GLN (Q) | 5 | 2.04% |
| Proline PRO (P) | 14 | 5.71% |
| Serine SER (S) | 29 | 11.84% |
| Arginine ARG (R) | 3 | 1.22% |
| Threonine THR (T) | 24 | 9.8% |
| Tryptophan TRP (W) | 3 | 1.22% |
| Valine VAL (V) | 13 | 5.31% |
| Tyrosine TYR (Y) | 10 | 4.08% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1112 |
| Hydrogen | H | 1673 |
| Nitrogen | N | 285 |
| Oxygen | O | 354 |
| Sulphur | S | 21 |
| Formula | C1112H1673N285O354S21 |
| Total Number of Atoms: | 3445 |
| Total number of positively charged residues (ARG + LYS): | 10 |
| Total number of negatively charged residues (ASP + GLU): | 15 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 32400 Absorption 0.1% (=1 g/l) 1.277, assuming all pairs of CYS residues form cystines Ext. coefficient 31400 Absorption 0.1% (=1 g/l) 1.238, assuming all CYS residues are reduced |
| Aromaticity: | 0.114 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 47.12 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [25.71, 33.47, 17.14] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 59.3878 |
| Grand average of hydropathicity (GRAVY): | 0.13 |