Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_821 |
| Number of amino acids: | 237 |
| Molecular Weight: | 24585.43 Da |
| Theoretical pI: | 4.8 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 19 | 8.02% |
| Cysteine CYS (C) | 16 | 6.75% |
| Glutamic Acid GLU (E) | 7 | 2.95% |
| Aspartic Acid ASP (D) | 12 | 5.06% |
| Glycine GLY (G) | 26 | 10.97% |
| Phynylalanine PHE (F) | 11 | 4.64% |
| Isoleucine ILE (I) | 4 | 1.69% |
| Histidine HIS (H) | 0 | 0% |
| Lysine LYS (K) | 10 | 4.22% |
| Methionine MET (M) | 2 | 0.84% |
| Leucine LEU (L) | 15 | 6.33% |
| Asparagine ASN (N) | 11 | 4.64% |
| Glutamine GLN (Q) | 4 | 1.69% |
| Proline PRO (P) | 15 | 6.33% |
| Serine SER (S) | 28 | 11.81% |
| Arginine ARG (R) | 5 | 2.11% |
| Threonine THR (T) | 25 | 10.55% |
| Tryptophan TRP (W) | 3 | 1.27% |
| Valine VAL (V) | 15 | 6.33% |
| Tyrosine TYR (Y) | 9 | 3.8% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1065 |
| Hydrogen | H | 1634 |
| Nitrogen | N | 280 |
| Oxygen | O | 353 |
| Sulphur | S | 18 |
| Formula | C1065H1634N280O353S18 |
| Total Number of Atoms: | 3350 |
| Total number of positively charged residues (ARG + LYS): | 15 |
| Total number of negatively charged residues (ASP + GLU): | 19 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 30910 Absorption 0.1% (=1 g/l) 1.257, assuming all pairs of CYS residues form cystines Ext. coefficient 29910 Absorption 0.1% (=1 g/l) 1.217, assuming all CYS residues are reduced |
| Aromaticity: | 0.097 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 41.09 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [24.05, 33.76, 18.14] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 57.6371 |
| Grand average of hydropathicity (GRAVY): | -0.10 |