Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_819 |
| Number of amino acids: | 246 |
| Molecular Weight: | 25994.47 Da |
| Theoretical pI: | 8.1 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 29 | 11.79% |
| Cysteine CYS (C) | 17 | 6.91% |
| Glutamic Acid GLU (E) | 6 | 2.44% |
| Aspartic Acid ASP (D) | 13 | 5.28% |
| Glycine GLY (G) | 27 | 10.98% |
| Phynylalanine PHE (F) | 13 | 5.28% |
| Isoleucine ILE (I) | 8 | 3.25% |
| Histidine HIS (H) | 1 | 0.41% |
| Lysine LYS (K) | 7 | 2.85% |
| Methionine MET (M) | 2 | 0.81% |
| Leucine LEU (L) | 12 | 4.88% |
| Asparagine ASN (N) | 12 | 4.88% |
| Glutamine GLN (Q) | 8 | 3.25% |
| Proline PRO (P) | 15 | 6.1% |
| Serine SER (S) | 14 | 5.69% |
| Arginine ARG (R) | 15 | 6.1% |
| Threonine THR (T) | 16 | 6.5% |
| Tryptophan TRP (W) | 3 | 1.22% |
| Valine VAL (V) | 20 | 8.13% |
| Tyrosine TYR (Y) | 8 | 3.25% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1133 |
| Hydrogen | H | 1751 |
| Nitrogen | N | 323 |
| Oxygen | O | 343 |
| Sulphur | S | 19 |
| Formula | C1133H1751N323O343S19 |
| Total Number of Atoms: | 3569 |
| Total number of positively charged residues (ARG + LYS): | 22 |
| Total number of negatively charged residues (ASP + GLU): | 19 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 29420 Absorption 0.1% (=1 g/l) 1.132, assuming all pairs of CYS residues form cystines Ext. coefficient 28420 Absorption 0.1% (=1 g/l) 1.093, assuming all CYS residues are reduced |
| Aromaticity: | 0.098 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 31.40 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [26.02, 27.64, 19.92] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 67.0731 |
| Grand average of hydropathicity (GRAVY): | -0.02 |