Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_750 |
| Number of amino acids: | 224 |
| Molecular Weight: | 24114.31 Da |
| Theoretical pI: | 6.98 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 14 | 6.25% |
| Cysteine CYS (C) | 16 | 7.14% |
| Glutamic Acid GLU (E) | 6 | 2.68% |
| Aspartic Acid ASP (D) | 9 | 4.02% |
| Glycine GLY (G) | 19 | 8.48% |
| Phynylalanine PHE (F) | 16 | 7.14% |
| Isoleucine ILE (I) | 6 | 2.68% |
| Histidine HIS (H) | 15 | 6.7% |
| Lysine LYS (K) | 9 | 4.02% |
| Methionine MET (M) | 1 | 0.45% |
| Leucine LEU (L) | 13 | 5.8% |
| Asparagine ASN (N) | 11 | 4.91% |
| Glutamine GLN (Q) | 5 | 2.23% |
| Proline PRO (P) | 20 | 8.93% |
| Serine SER (S) | 20 | 8.93% |
| Arginine ARG (R) | 5 | 2.23% |
| Threonine THR (T) | 15 | 6.7% |
| Tryptophan TRP (W) | 3 | 1.34% |
| Valine VAL (V) | 18 | 8.04% |
| Tyrosine TYR (Y) | 3 | 1.34% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1070 |
| Hydrogen | H | 1601 |
| Nitrogen | N | 297 |
| Oxygen | O | 309 |
| Sulphur | S | 17 |
| Formula | C1070H1601N297O309S17 |
| Total Number of Atoms: | 3294 |
| Total number of positively charged residues (ARG + LYS): | 14 |
| Total number of negatively charged residues (ASP + GLU): | 15 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 21970 Absorption 0.1% (=1 g/l) 0.911, assuming all pairs of CYS residues form cystines Ext. coefficient 20970 Absorption 0.1% (=1 g/l) 0.870, assuming all CYS residues are reduced |
| Aromaticity: | 0.098 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 43.82 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [26.34, 31.25, 15.18] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 62.6339 |
| Grand average of hydropathicity (GRAVY): | -0.10 |