Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_733 |
| Number of amino acids: | 153 |
| Molecular Weight: | 16178.94 Da |
| Theoretical pI: | 5.49 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 12 | 7.84% |
| Cysteine CYS (C) | 13 | 8.5% |
| Glutamic Acid GLU (E) | 10 | 6.54% |
| Aspartic Acid ASP (D) | 5 | 3.27% |
| Glycine GLY (G) | 16 | 10.46% |
| Phynylalanine PHE (F) | 6 | 3.92% |
| Isoleucine ILE (I) | 5 | 3.27% |
| Histidine HIS (H) | 0 | 0% |
| Lysine LYS (K) | 9 | 5.88% |
| Methionine MET (M) | 4 | 2.61% |
| Leucine LEU (L) | 17 | 11.11% |
| Asparagine ASN (N) | 6 | 3.92% |
| Glutamine GLN (Q) | 3 | 1.96% |
| Proline PRO (P) | 10 | 6.54% |
| Serine SER (S) | 5 | 3.27% |
| Arginine ARG (R) | 5 | 3.27% |
| Threonine THR (T) | 15 | 9.8% |
| Tryptophan TRP (W) | 2 | 1.31% |
| Valine VAL (V) | 10 | 6.54% |
| Tyrosine TYR (Y) | 0 | 0% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 703 |
| Hydrogen | H | 1140 |
| Nitrogen | N | 188 |
| Oxygen | O | 213 |
| Sulphur | S | 17 |
| Formula | C703H1140N188O213S17 |
| Total Number of Atoms: | 2261 |
| Total number of positively charged residues (ARG + LYS): | 14 |
| Total number of negatively charged residues (ASP + GLU): | 15 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 11750 Absorption 0.1% (=1 g/l) 0.726, assuming all pairs of CYS residues form cystines Ext. coefficient 11000 Absorption 0.1% (=1 g/l) 0.680, assuming all CYS residues are reduced |
| Aromaticity: | 0.052 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 33.38 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [26.14, 24.18, 28.10] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 82.8758 |
| Grand average of hydropathicity (GRAVY): | 0.18 |