Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_650 |
| Number of amino acids: | 206 |
| Molecular Weight: | 22074.71 Da |
| Theoretical pI: | 8.16 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 21 | 10.19% |
| Cysteine CYS (C) | 16 | 7.77% |
| Glutamic Acid GLU (E) | 4 | 1.94% |
| Aspartic Acid ASP (D) | 12 | 5.83% |
| Glycine GLY (G) | 22 | 10.68% |
| Phynylalanine PHE (F) | 12 | 5.83% |
| Isoleucine ILE (I) | 4 | 1.94% |
| Histidine HIS (H) | 1 | 0.49% |
| Lysine LYS (K) | 6 | 2.91% |
| Methionine MET (M) | 0 | 0% |
| Leucine LEU (L) | 7 | 3.4% |
| Asparagine ASN (N) | 13 | 6.31% |
| Glutamine GLN (Q) | 7 | 3.4% |
| Proline PRO (P) | 14 | 6.8% |
| Serine SER (S) | 12 | 5.83% |
| Arginine ARG (R) | 13 | 6.31% |
| Threonine THR (T) | 14 | 6.8% |
| Tryptophan TRP (W) | 3 | 1.46% |
| Valine VAL (V) | 16 | 7.77% |
| Tyrosine TYR (Y) | 9 | 4.37% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 960 |
| Hydrogen | H | 1450 |
| Nitrogen | N | 276 |
| Oxygen | O | 294 |
| Sulphur | S | 16 |
| Formula | C960H1450N276O294S16 |
| Total Number of Atoms: | 2996 |
| Total number of positively charged residues (ARG + LYS): | 19 |
| Total number of negatively charged residues (ASP + GLU): | 16 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 30910 Absorption 0.1% (=1 g/l) 1.400, assuming all pairs of CYS residues form cystines Ext. coefficient 29910 Absorption 0.1% (=1 g/l) 1.355, assuming all CYS residues are reduced |
| Aromaticity: | 0.117 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 30.19 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [24.76, 29.61, 15.53] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 53.5437 |
| Grand average of hydropathicity (GRAVY): | -0.26 |