Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_6151 |
| Number of amino acids: | 89 |
| Molecular Weight: | 10277.12 Da |
| Theoretical pI: | 8.64 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 1 | 1.12% |
| Cysteine CYS (C) | 8 | 8.99% |
| Glutamic Acid GLU (E) | 5 | 5.62% |
| Aspartic Acid ASP (D) | 4 | 4.49% |
| Glycine GLY (G) | 5 | 5.62% |
| Phynylalanine PHE (F) | 2 | 2.25% |
| Isoleucine ILE (I) | 3 | 3.37% |
| Histidine HIS (H) | 3 | 3.37% |
| Lysine LYS (K) | 10 | 11.24% |
| Methionine MET (M) | 5 | 5.62% |
| Leucine LEU (L) | 9 | 10.11% |
| Asparagine ASN (N) | 2 | 2.25% |
| Glutamine GLN (Q) | 4 | 4.49% |
| Proline PRO (P) | 1 | 1.12% |
| Serine SER (S) | 6 | 6.74% |
| Arginine ARG (R) | 3 | 3.37% |
| Threonine THR (T) | 7 | 7.87% |
| Tryptophan TRP (W) | 1 | 1.12% |
| Valine VAL (V) | 6 | 6.74% |
| Tyrosine TYR (Y) | 4 | 4.49% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 445 |
| Hydrogen | H | 719 |
| Nitrogen | N | 121 |
| Oxygen | O | 131 |
| Sulphur | S | 13 |
| Formula | C445H719N121O131S13 |
| Total Number of Atoms: | 1429 |
| Total number of positively charged residues (ARG + LYS): | 13 |
| Total number of negatively charged residues (ASP + GLU): | 9 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 11960 Absorption 0.1% (=1 g/l) 1.164, assuming all pairs of CYS residues form cystines Ext. coefficient 11460 Absorption 0.1% (=1 g/l) 1.115, assuming all CYS residues are reduced |
| Aromaticity: | 0.079 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 59.78 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.09, 15.73, 22.47] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 73.2586 |
| Grand average of hydropathicity (GRAVY): | -0.27 |