Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_6148 |
| Number of amino acids: | 256 |
| Molecular Weight: | 29338.64 Da |
| Theoretical pI: | 9.87 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 4 | 1.56% |
| Cysteine CYS (C) | 0 | 0% |
| Glutamic Acid GLU (E) | 9 | 3.52% |
| Aspartic Acid ASP (D) | 1 | 0.39% |
| Glycine GLY (G) | 1 | 0.39% |
| Phynylalanine PHE (F) | 0 | 0% |
| Isoleucine ILE (I) | 7 | 2.73% |
| Histidine HIS (H) | 0 | 0% |
| Lysine LYS (K) | 45 | 17.58% |
| Methionine MET (M) | 2 | 0.78% |
| Leucine LEU (L) | 8 | 3.13% |
| Asparagine ASN (N) | 2 | 0.78% |
| Glutamine GLN (Q) | 1 | 0.39% |
| Proline PRO (P) | 92 | 35.94% |
| Serine SER (S) | 6 | 2.34% |
| Arginine ARG (R) | 1 | 0.39% |
| Threonine THR (T) | 1 | 0.39% |
| Tryptophan TRP (W) | 0 | 0% |
| Valine VAL (V) | 39 | 15.23% |
| Tyrosine TYR (Y) | 37 | 14.45% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1462 |
| Hydrogen | H | 2213 |
| Nitrogen | N | 307 |
| Oxygen | O | 324 |
| Sulphur | S | 2 |
| Formula | C1462H2213N307O324S2 |
| Total Number of Atoms: | 4308 |
| Total number of positively charged residues (ARG + LYS): | 46 |
| Total number of negatively charged residues (ASP + GLU): | 10 |
| Extinction Coefficient: | This protein does not contain any Tryptophan residues. Experience shows that this could result in more than 10% error in the computed extinction coefficient. Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 55130 Absorption 0.1% (=1 g/l) 1.879 |
| Aromaticity: | 0.145 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 58.58 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [35.55, 39.45, 8.98] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 68.5938 |
| Grand average of hydropathicity (GRAVY): | -0.74 |