Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_6138 |
| Number of amino acids: | 161 |
| Molecular Weight: | 17676.94 Da |
| Theoretical pI: | 9.08 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 15 | 9.32% |
| Cysteine CYS (C) | 6 | 3.73% |
| Glutamic Acid GLU (E) | 5 | 3.11% |
| Aspartic Acid ASP (D) | 5 | 3.11% |
| Glycine GLY (G) | 18 | 11.18% |
| Phynylalanine PHE (F) | 3 | 1.86% |
| Isoleucine ILE (I) | 4 | 2.48% |
| Histidine HIS (H) | 3 | 1.86% |
| Lysine LYS (K) | 5 | 3.11% |
| Methionine MET (M) | 3 | 1.86% |
| Leucine LEU (L) | 10 | 6.21% |
| Asparagine ASN (N) | 14 | 8.7% |
| Glutamine GLN (Q) | 6 | 3.73% |
| Proline PRO (P) | 6 | 3.73% |
| Serine SER (S) | 11 | 6.83% |
| Arginine ARG (R) | 11 | 6.83% |
| Threonine THR (T) | 4 | 2.48% |
| Tryptophan TRP (W) | 4 | 2.48% |
| Valine VAL (V) | 17 | 10.56% |
| Tyrosine TYR (Y) | 11 | 6.83% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 777 |
| Hydrogen | H | 1191 |
| Nitrogen | N | 229 |
| Oxygen | O | 228 |
| Sulphur | S | 9 |
| Formula | C777H1191N229O228S9 |
| Total Number of Atoms: | 2434 |
| Total number of positively charged residues (ARG + LYS): | 16 |
| Total number of negatively charged residues (ASP + GLU): | 10 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 38765 Absorption 0.1% (=1 g/l) 2.193, assuming all pairs of CYS residues form cystines Ext. coefficient 38390 Absorption 0.1% (=1 g/l) 2.172, assuming all CYS residues are reduced |
| Aromaticity: | 0.112 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 26.77 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.43, 30.43, 20.50] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 73.8509 |
| Grand average of hydropathicity (GRAVY): | -0.29 |