Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_6108 |
| Number of amino acids: | 109 |
| Molecular Weight: | 11767.42 Da |
| Theoretical pI: | 5.85 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 15 | 13.76% |
| Cysteine CYS (C) | 3 | 2.75% |
| Glutamic Acid GLU (E) | 7 | 6.42% |
| Aspartic Acid ASP (D) | 4 | 3.67% |
| Glycine GLY (G) | 5 | 4.59% |
| Phynylalanine PHE (F) | 4 | 3.67% |
| Isoleucine ILE (I) | 9 | 8.26% |
| Histidine HIS (H) | 3 | 2.75% |
| Lysine LYS (K) | 8 | 7.34% |
| Methionine MET (M) | 3 | 2.75% |
| Leucine LEU (L) | 7 | 6.42% |
| Asparagine ASN (N) | 13 | 11.93% |
| Glutamine GLN (Q) | 2 | 1.83% |
| Proline PRO (P) | 2 | 1.83% |
| Serine SER (S) | 8 | 7.34% |
| Arginine ARG (R) | 1 | 0.92% |
| Threonine THR (T) | 3 | 2.75% |
| Tryptophan TRP (W) | 1 | 0.92% |
| Valine VAL (V) | 9 | 8.26% |
| Tyrosine TYR (Y) | 2 | 1.83% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 516 |
| Hydrogen | H | 822 |
| Nitrogen | N | 142 |
| Oxygen | O | 160 |
| Sulphur | S | 6 |
| Formula | C516H822N142O160S6 |
| Total Number of Atoms: | 1646 |
| Total number of positively charged residues (ARG + LYS): | 9 |
| Total number of negatively charged residues (ASP + GLU): | 11 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 8605 Absorption 0.1% (=1 g/l) 0.731, assuming all pairs of CYS residues form cystines Ext. coefficient 8480 Absorption 0.1% (=1 g/l) 0.721, assuming all CYS residues are reduced |
| Aromaticity: | 0.064 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 37.03 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [29.36, 25.69, 29.36] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 94.9542 |
| Grand average of hydropathicity (GRAVY): | 0.03 |