Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_6093 |
| Number of amino acids: | 256 |
| Molecular Weight: | 27148.48 Da |
| Theoretical pI: | 4.86 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 34 | 13.28% |
| Cysteine CYS (C) | 10 | 3.91% |
| Glutamic Acid GLU (E) | 2 | 0.78% |
| Aspartic Acid ASP (D) | 11 | 4.3% |
| Glycine GLY (G) | 33 | 12.89% |
| Phynylalanine PHE (F) | 10 | 3.91% |
| Isoleucine ILE (I) | 6 | 2.34% |
| Histidine HIS (H) | 1 | 0.39% |
| Lysine LYS (K) | 2 | 0.78% |
| Methionine MET (M) | 6 | 2.34% |
| Leucine LEU (L) | 17 | 6.64% |
| Asparagine ASN (N) | 11 | 4.3% |
| Glutamine GLN (Q) | 19 | 7.42% |
| Proline PRO (P) | 11 | 4.3% |
| Serine SER (S) | 17 | 6.64% |
| Arginine ARG (R) | 8 | 3.13% |
| Threonine THR (T) | 17 | 6.64% |
| Tryptophan TRP (W) | 12 | 4.69% |
| Valine VAL (V) | 18 | 7.03% |
| Tyrosine TYR (Y) | 11 | 4.3% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1210 |
| Hydrogen | H | 1794 |
| Nitrogen | N | 326 |
| Oxygen | O | 358 |
| Sulphur | S | 16 |
| Formula | C1210H1794N326O358S16 |
| Total Number of Atoms: | 3704 |
| Total number of positively charged residues (ARG + LYS): | 10 |
| Total number of negatively charged residues (ASP + GLU): | 13 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 83015 Absorption 0.1% (=1 g/l) 3.058, assuming all pairs of CYS residues form cystines Ext. coefficient 82390 Absorption 0.1% (=1 g/l) 3.035, assuming all CYS residues are reduced |
| Aromaticity: | 0.129 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 40.03 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.91, 28.12, 23.05] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 68.7109 |
| Grand average of hydropathicity (GRAVY): | 0.05 |