Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_6092 |
| Number of amino acids: | 209 |
| Molecular Weight: | 22651.46 Da |
| Theoretical pI: | 8.34 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 12 | 5.74% |
| Cysteine CYS (C) | 4 | 1.91% |
| Glutamic Acid GLU (E) | 9 | 4.31% |
| Aspartic Acid ASP (D) | 5 | 2.39% |
| Glycine GLY (G) | 19 | 9.09% |
| Phynylalanine PHE (F) | 14 | 6.7% |
| Isoleucine ILE (I) | 13 | 6.22% |
| Histidine HIS (H) | 2 | 0.96% |
| Lysine LYS (K) | 11 | 5.26% |
| Methionine MET (M) | 7 | 3.35% |
| Leucine LEU (L) | 23 | 11% |
| Asparagine ASN (N) | 7 | 3.35% |
| Glutamine GLN (Q) | 9 | 4.31% |
| Proline PRO (P) | 18 | 8.61% |
| Serine SER (S) | 20 | 9.57% |
| Arginine ARG (R) | 5 | 2.39% |
| Threonine THR (T) | 10 | 4.78% |
| Tryptophan TRP (W) | 2 | 0.96% |
| Valine VAL (V) | 14 | 6.7% |
| Tyrosine TYR (Y) | 5 | 2.39% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1036 |
| Hydrogen | H | 1619 |
| Nitrogen | N | 257 |
| Oxygen | O | 289 |
| Sulphur | S | 11 |
| Formula | C1036H1619N257O289S11 |
| Total Number of Atoms: | 3212 |
| Total number of positively charged residues (ARG + LYS): | 16 |
| Total number of negatively charged residues (ASP + GLU): | 14 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 18700 Absorption 0.1% (=1 g/l) 0.826, assuming all pairs of CYS residues form cystines Ext. coefficient 18450 Absorption 0.1% (=1 g/l) 0.815, assuming all CYS residues are reduced |
| Aromaticity: | 0.100 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 47.74 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [33.97, 30.62, 24.40] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 92.3446 |
| Grand average of hydropathicity (GRAVY): | 0.21 |