Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_6090 |
| Number of amino acids: | 220 |
| Molecular Weight: | 25275.48 Da |
| Theoretical pI: | 6.68 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 15 | 6.82% |
| Cysteine CYS (C) | 8 | 3.64% |
| Glutamic Acid GLU (E) | 5 | 2.27% |
| Aspartic Acid ASP (D) | 2 | 0.91% |
| Glycine GLY (G) | 7 | 3.18% |
| Phynylalanine PHE (F) | 14 | 6.36% |
| Isoleucine ILE (I) | 11 | 5% |
| Histidine HIS (H) | 2 | 0.91% |
| Lysine LYS (K) | 1 | 0.45% |
| Methionine MET (M) | 13 | 5.91% |
| Leucine LEU (L) | 21 | 9.55% |
| Asparagine ASN (N) | 1 | 0.45% |
| Glutamine GLN (Q) | 64 | 29.09% |
| Proline PRO (P) | 20 | 9.09% |
| Serine SER (S) | 6 | 2.73% |
| Arginine ARG (R) | 6 | 2.73% |
| Threonine THR (T) | 7 | 3.18% |
| Tryptophan TRP (W) | 0 | 0% |
| Valine VAL (V) | 14 | 6.36% |
| Tyrosine TYR (Y) | 3 | 1.36% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1120 |
| Hydrogen | H | 1766 |
| Nitrogen | N | 308 |
| Oxygen | O | 316 |
| Sulphur | S | 21 |
| Formula | C1120H1766N308O316S21 |
| Total Number of Atoms: | 3531 |
| Total number of positively charged residues (ARG + LYS): | 7 |
| Total number of negatively charged residues (ASP + GLU): | 7 |
| Extinction Coefficient: | This protein does not contain any Tryptophan residues. Experience shows that this could result in more than 10% error in the computed extinction coefficient. Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 4970 Absorption 0.1% (=1 g/l) 0.197, assuming all pairs of CYS residues form cystines Ext. coefficient 4470 Absorption 0.1% (=1 g/l) 0.177, assuming all CYS residues are reduced |
| Aromaticity: | 0.077 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 82.55 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.64, 15.45, 24.55] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 82 |
| Grand average of hydropathicity (GRAVY): | -0.18 |