Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_6080 |
| Number of amino acids: | 240 |
| Molecular Weight: | 26254.64 Da |
| Theoretical pI: | 8.41 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 33 | 13.75% |
| Cysteine CYS (C) | 4 | 1.67% |
| Glutamic Acid GLU (E) | 1 | 0.42% |
| Aspartic Acid ASP (D) | 1 | 0.42% |
| Glycine GLY (G) | 2 | 0.83% |
| Phynylalanine PHE (F) | 12 | 5% |
| Isoleucine ILE (I) | 13 | 5.42% |
| Histidine HIS (H) | 1 | 0.42% |
| Lysine LYS (K) | 1 | 0.42% |
| Methionine MET (M) | 2 | 0.83% |
| Leucine LEU (L) | 48 | 20% |
| Asparagine ASN (N) | 11 | 4.58% |
| Glutamine GLN (Q) | 43 | 17.92% |
| Proline PRO (P) | 21 | 8.75% |
| Serine SER (S) | 20 | 8.33% |
| Arginine ARG (R) | 3 | 1.25% |
| Threonine THR (T) | 9 | 3.75% |
| Tryptophan TRP (W) | 0 | 0% |
| Valine VAL (V) | 7 | 2.92% |
| Tyrosine TYR (Y) | 8 | 3.33% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1205 |
| Hydrogen | H | 1912 |
| Nitrogen | N | 306 |
| Oxygen | O | 336 |
| Sulphur | S | 6 |
| Formula | C1205H1912N306O336S6 |
| Total Number of Atoms: | 3765 |
| Total number of positively charged residues (ARG + LYS): | 4 |
| Total number of negatively charged residues (ASP + GLU): | 2 |
| Extinction Coefficient: | This protein does not contain any Tryptophan residues. Experience shows that this could result in more than 10% error in the computed extinction coefficient. Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 12170 Absorption 0.1% (=1 g/l) 0.464, assuming all pairs of CYS residues form cystines Ext. coefficient 11920 Absorption 0.1% (=1 g/l) 0.454, assuming all CYS residues are reduced |
| Aromaticity: | 0.083 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 70.44 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [36.67, 22.50, 35.00] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 121.333 |
| Grand average of hydropathicity (GRAVY): | 0.39 |