Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_6040 |
| Number of amino acids: | 100 |
| Molecular Weight: | 10220.82 Da |
| Theoretical pI: | 7.49 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 16 | 16% |
| Cysteine CYS (C) | 9 | 9% |
| Glutamic Acid GLU (E) | 2 | 2% |
| Aspartic Acid ASP (D) | 1 | 1% |
| Glycine GLY (G) | 7 | 7% |
| Phynylalanine PHE (F) | 2 | 2% |
| Isoleucine ILE (I) | 2 | 2% |
| Histidine HIS (H) | 1 | 1% |
| Lysine LYS (K) | 3 | 3% |
| Methionine MET (M) | 3 | 3% |
| Leucine LEU (L) | 11 | 11% |
| Asparagine ASN (N) | 11 | 11% |
| Glutamine GLN (Q) | 5 | 5% |
| Proline PRO (P) | 4 | 4% |
| Serine SER (S) | 8 | 8% |
| Arginine ARG (R) | 1 | 1% |
| Threonine THR (T) | 4 | 4% |
| Tryptophan TRP (W) | 1 | 1% |
| Valine VAL (V) | 8 | 8% |
| Tyrosine TYR (Y) | 1 | 1% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 433 |
| Hydrogen | H | 703 |
| Nitrogen | N | 125 |
| Oxygen | O | 136 |
| Sulphur | S | 12 |
| Formula | C433H703N125O136S12 |
| Total Number of Atoms: | 1409 |
| Total number of positively charged residues (ARG + LYS): | 4 |
| Total number of negatively charged residues (ASP + GLU): | 3 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 7490 Absorption 0.1% (=1 g/l) 0.733, assuming all pairs of CYS residues form cystines Ext. coefficient 6990 Absorption 0.1% (=1 g/l) 0.684, assuming all CYS residues are reduced |
| Aromaticity: | 0.040 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 38.53 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [25.00, 30.00, 32.00] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 89.9 |
| Grand average of hydropathicity (GRAVY): | 0.41 |