Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_6014 |
| Number of amino acids: | 325 |
| Molecular Weight: | 35624.39 Da |
| Theoretical pI: | 9.35 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 26 | 8% |
| Cysteine CYS (C) | 8 | 2.46% |
| Glutamic Acid GLU (E) | 8 | 2.46% |
| Aspartic Acid ASP (D) | 23 | 7.08% |
| Glycine GLY (G) | 20 | 6.15% |
| Phynylalanine PHE (F) | 14 | 4.31% |
| Isoleucine ILE (I) | 14 | 4.31% |
| Histidine HIS (H) | 4 | 1.23% |
| Lysine LYS (K) | 27 | 8.31% |
| Methionine MET (M) | 5 | 1.54% |
| Leucine LEU (L) | 38 | 11.69% |
| Asparagine ASN (N) | 17 | 5.23% |
| Glutamine GLN (Q) | 7 | 2.15% |
| Proline PRO (P) | 17 | 5.23% |
| Serine SER (S) | 24 | 7.38% |
| Arginine ARG (R) | 17 | 5.23% |
| Threonine THR (T) | 16 | 4.92% |
| Tryptophan TRP (W) | 2 | 0.62% |
| Valine VAL (V) | 30 | 9.23% |
| Tyrosine TYR (Y) | 8 | 2.46% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1593 |
| Hydrogen | H | 2573 |
| Nitrogen | N | 437 |
| Oxygen | O | 460 |
| Sulphur | S | 13 |
| Formula | C1593H2573N437O460S13 |
| Total Number of Atoms: | 5076 |
| Total number of positively charged residues (ARG + LYS): | 44 |
| Total number of negatively charged residues (ASP + GLU): | 31 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 23420 Absorption 0.1% (=1 g/l) 0.657, assuming all pairs of CYS residues form cystines Ext. coefficient 22920 Absorption 0.1% (=1 g/l) 0.643, assuming all CYS residues are reduced |
| Aromaticity: | 0.074 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 35.78 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.62, 24.00, 23.69] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 97.1692 |
| Grand average of hydropathicity (GRAVY): | -0.05 |