Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5999 |
| Number of amino acids: | 136 |
| Molecular Weight: | 14760.99 Da |
| Theoretical pI: | 7.76 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 18 | 13.24% |
| Cysteine CYS (C) | 2 | 1.47% |
| Glutamic Acid GLU (E) | 9 | 6.62% |
| Aspartic Acid ASP (D) | 9 | 6.62% |
| Glycine GLY (G) | 10 | 7.35% |
| Phynylalanine PHE (F) | 5 | 3.68% |
| Isoleucine ILE (I) | 4 | 2.94% |
| Histidine HIS (H) | 3 | 2.21% |
| Lysine LYS (K) | 12 | 8.82% |
| Methionine MET (M) | 3 | 2.21% |
| Leucine LEU (L) | 14 | 10.29% |
| Asparagine ASN (N) | 1 | 0.74% |
| Glutamine GLN (Q) | 3 | 2.21% |
| Proline PRO (P) | 3 | 2.21% |
| Serine SER (S) | 11 | 8.09% |
| Arginine ARG (R) | 7 | 5.15% |
| Threonine THR (T) | 4 | 2.94% |
| Tryptophan TRP (W) | 1 | 0.74% |
| Valine VAL (V) | 13 | 9.56% |
| Tyrosine TYR (Y) | 4 | 2.94% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 656 |
| Hydrogen | H | 1056 |
| Nitrogen | N | 180 |
| Oxygen | O | 196 |
| Sulphur | S | 5 |
| Formula | C656H1056N180O196S5 |
| Total Number of Atoms: | 2093 |
| Total number of positively charged residues (ARG + LYS): | 19 |
| Total number of negatively charged residues (ASP + GLU): | 18 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 11585 Absorption 0.1% (=1 g/l) 0.785, assuming all pairs of CYS residues form cystines Ext. coefficient 11460 Absorption 0.1% (=1 g/l) 0.776, assuming all CYS residues are reduced |
| Aromaticity: | 0.074 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 34.20 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.15, 18.38, 32.35] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 92.5735 |
| Grand average of hydropathicity (GRAVY): | -0.06 |