Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5995 |
| Number of amino acids: | 252 |
| Molecular Weight: | 27863.75 Da |
| Theoretical pI: | 9.04 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 14 | 5.56% |
| Cysteine CYS (C) | 12 | 4.76% |
| Glutamic Acid GLU (E) | 10 | 3.97% |
| Aspartic Acid ASP (D) | 9 | 3.57% |
| Glycine GLY (G) | 17 | 6.75% |
| Phynylalanine PHE (F) | 14 | 5.56% |
| Isoleucine ILE (I) | 15 | 5.95% |
| Histidine HIS (H) | 2 | 0.79% |
| Lysine LYS (K) | 19 | 7.54% |
| Methionine MET (M) | 1 | 0.4% |
| Leucine LEU (L) | 24 | 9.52% |
| Asparagine ASN (N) | 23 | 9.13% |
| Glutamine GLN (Q) | 8 | 3.17% |
| Proline PRO (P) | 8 | 3.17% |
| Serine SER (S) | 26 | 10.32% |
| Arginine ARG (R) | 10 | 3.97% |
| Threonine THR (T) | 17 | 6.75% |
| Tryptophan TRP (W) | 2 | 0.79% |
| Valine VAL (V) | 12 | 4.76% |
| Tyrosine TYR (Y) | 9 | 3.57% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1230 |
| Hydrogen | H | 1940 |
| Nitrogen | N | 338 |
| Oxygen | O | 374 |
| Sulphur | S | 13 |
| Formula | C1230H1940N338O374S13 |
| Total Number of Atoms: | 3895 |
| Total number of positively charged residues (ARG + LYS): | 29 |
| Total number of negatively charged residues (ASP + GLU): | 19 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 25160 Absorption 0.1% (=1 g/l) 0.903, assuming all pairs of CYS residues form cystines Ext. coefficient 24410 Absorption 0.1% (=1 g/l) 0.876, assuming all CYS residues are reduced |
| Aromaticity: | 0.099 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 39.67 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.16, 29.37, 19.44] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 79.7222 |
| Grand average of hydropathicity (GRAVY): | -0.24 |