Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5994 |
| Number of amino acids: | 327 |
| Molecular Weight: | 37122.29 Da |
| Theoretical pI: | 7.77 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 12 | 3.67% |
| Cysteine CYS (C) | 7 | 2.14% |
| Glutamic Acid GLU (E) | 3 | 0.92% |
| Aspartic Acid ASP (D) | 3 | 0.92% |
| Glycine GLY (G) | 10 | 3.06% |
| Phynylalanine PHE (F) | 15 | 4.59% |
| Isoleucine ILE (I) | 21 | 6.42% |
| Histidine HIS (H) | 4 | 1.22% |
| Lysine LYS (K) | 3 | 0.92% |
| Methionine MET (M) | 6 | 1.83% |
| Leucine LEU (L) | 26 | 7.95% |
| Asparagine ASN (N) | 4 | 1.22% |
| Glutamine GLN (Q) | 109 | 33.33% |
| Proline PRO (P) | 54 | 16.51% |
| Serine SER (S) | 18 | 5.5% |
| Arginine ARG (R) | 4 | 1.22% |
| Threonine THR (T) | 10 | 3.06% |
| Tryptophan TRP (W) | 3 | 0.92% |
| Valine VAL (V) | 14 | 4.28% |
| Tyrosine TYR (Y) | 1 | 0.31% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1654 |
| Hydrogen | H | 2580 |
| Nitrogen | N | 466 |
| Oxygen | O | 482 |
| Sulphur | S | 13 |
| Formula | C1654H2580N466O482S13 |
| Total Number of Atoms: | 5195 |
| Total number of positively charged residues (ARG + LYS): | 7 |
| Total number of negatively charged residues (ASP + GLU): | 6 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 18365 Absorption 0.1% (=1 g/l) 0.495, assuming all pairs of CYS residues form cystines Ext. coefficient 17990 Absorption 0.1% (=1 g/l) 0.485, assuming all CYS residues are reduced |
| Aromaticity: | 0.058 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 114.05 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [24.46, 26.30, 14.37] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 72.1407 |
| Grand average of hydropathicity (GRAVY): | -0.70 |