Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5993 |
| Number of amino acids: | 287 |
| Molecular Weight: | 32475.21 Da |
| Theoretical pI: | 5.96 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 10 | 3.48% |
| Cysteine CYS (C) | 15 | 5.23% |
| Glutamic Acid GLU (E) | 10 | 3.48% |
| Aspartic Acid ASP (D) | 15 | 5.23% |
| Glycine GLY (G) | 11 | 3.83% |
| Phynylalanine PHE (F) | 18 | 6.27% |
| Isoleucine ILE (I) | 21 | 7.32% |
| Histidine HIS (H) | 5 | 1.74% |
| Lysine LYS (K) | 14 | 4.88% |
| Methionine MET (M) | 10 | 3.48% |
| Leucine LEU (L) | 24 | 8.36% |
| Asparagine ASN (N) | 22 | 7.67% |
| Glutamine GLN (Q) | 4 | 1.39% |
| Proline PRO (P) | 14 | 4.88% |
| Serine SER (S) | 29 | 10.1% |
| Arginine ARG (R) | 8 | 2.79% |
| Threonine THR (T) | 28 | 9.76% |
| Tryptophan TRP (W) | 3 | 1.05% |
| Valine VAL (V) | 12 | 4.18% |
| Tyrosine TYR (Y) | 14 | 4.88% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1447 |
| Hydrogen | H | 2218 |
| Nitrogen | N | 364 |
| Oxygen | O | 435 |
| Sulphur | S | 25 |
| Formula | C1447H2218N364O435S25 |
| Total Number of Atoms: | 4489 |
| Total number of positively charged residues (ARG + LYS): | 22 |
| Total number of negatively charged residues (ASP + GLU): | 25 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 38235 Absorption 0.1% (=1 g/l) 1.177, assuming all pairs of CYS residues form cystines Ext. coefficient 37360 Absorption 0.1% (=1 g/l) 1.150, assuming all CYS residues are reduced |
| Aromaticity: | 0.122 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 45.43 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.06, 26.48, 18.82] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 76.7596 |
| Grand average of hydropathicity (GRAVY): | -0.05 |