Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5990 |
| Number of amino acids: | 441 |
| Molecular Weight: | 50265.13 Da |
| Theoretical pI: | 5.68 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 16 | 3.63% |
| Cysteine CYS (C) | 9 | 2.04% |
| Glutamic Acid GLU (E) | 29 | 6.58% |
| Aspartic Acid ASP (D) | 18 | 4.08% |
| Glycine GLY (G) | 31 | 7.03% |
| Phynylalanine PHE (F) | 20 | 4.54% |
| Isoleucine ILE (I) | 32 | 7.26% |
| Histidine HIS (H) | 9 | 2.04% |
| Lysine LYS (K) | 24 | 5.44% |
| Methionine MET (M) | 8 | 1.81% |
| Leucine LEU (L) | 44 | 9.98% |
| Asparagine ASN (N) | 24 | 5.44% |
| Glutamine GLN (Q) | 17 | 3.85% |
| Proline PRO (P) | 25 | 5.67% |
| Serine SER (S) | 38 | 8.62% |
| Arginine ARG (R) | 15 | 3.4% |
| Threonine THR (T) | 28 | 6.35% |
| Tryptophan TRP (W) | 9 | 2.04% |
| Valine VAL (V) | 18 | 4.08% |
| Tyrosine TYR (Y) | 27 | 6.12% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2282 |
| Hydrogen | H | 3468 |
| Nitrogen | N | 578 |
| Oxygen | O | 670 |
| Sulphur | S | 17 |
| Formula | C2282H3468N578O670S17 |
| Total Number of Atoms: | 7015 |
| Total number of positively charged residues (ARG + LYS): | 39 |
| Total number of negatively charged residues (ASP + GLU): | 47 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 90230 Absorption 0.1% (=1 g/l) 1.795, assuming all pairs of CYS residues form cystines Ext. coefficient 89730 Absorption 0.1% (=1 g/l) 1.785, assuming all CYS residues are reduced |
| Aromaticity: | 0.127 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 41.15 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [34.01, 26.76, 22.00] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 82.6757 |
| Grand average of hydropathicity (GRAVY): | -0.30 |