Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5962 |
| Number of amino acids: | 286 |
| Molecular Weight: | 32963.37 Da |
| Theoretical pI: | 7.8 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 11 | 3.85% |
| Cysteine CYS (C) | 6 | 2.1% |
| Glutamic Acid GLU (E) | 5 | 1.75% |
| Aspartic Acid ASP (D) | 1 | 0.35% |
| Glycine GLY (G) | 7 | 2.45% |
| Phynylalanine PHE (F) | 12 | 4.2% |
| Isoleucine ILE (I) | 15 | 5.24% |
| Histidine HIS (H) | 6 | 2.1% |
| Lysine LYS (K) | 2 | 0.7% |
| Methionine MET (M) | 3 | 1.05% |
| Leucine LEU (L) | 27 | 9.44% |
| Asparagine ASN (N) | 7 | 2.45% |
| Glutamine GLN (Q) | 91 | 31.82% |
| Proline PRO (P) | 41 | 14.34% |
| Serine SER (S) | 14 | 4.9% |
| Arginine ARG (R) | 5 | 1.75% |
| Threonine THR (T) | 9 | 3.15% |
| Tryptophan TRP (W) | 1 | 0.35% |
| Valine VAL (V) | 14 | 4.9% |
| Tyrosine TYR (Y) | 9 | 3.15% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1475 |
| Hydrogen | H | 2278 |
| Nitrogen | N | 414 |
| Oxygen | O | 429 |
| Sulphur | S | 9 |
| Formula | C1475H2278N414O429S9 |
| Total Number of Atoms: | 4605 |
| Total number of positively charged residues (ARG + LYS): | 7 |
| Total number of negatively charged residues (ASP + GLU): | 6 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 19285 Absorption 0.1% (=1 g/l) 0.585, assuming all pairs of CYS residues form cystines Ext. coefficient 18910 Absorption 0.1% (=1 g/l) 0.574, assuming all CYS residues are reduced |
| Aromaticity: | 0.077 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 112.07 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [27.27, 24.13, 16.08] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 75.3147 |
| Grand average of hydropathicity (GRAVY): | -0.73 |