Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5958 |
| Number of amino acids: | 111 |
| Molecular Weight: | 12609.87 Da |
| Theoretical pI: | 7.97 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 6 | 5.41% |
| Cysteine CYS (C) | 2 | 1.8% |
| Glutamic Acid GLU (E) | 9 | 8.11% |
| Aspartic Acid ASP (D) | 5 | 4.5% |
| Glycine GLY (G) | 6 | 5.41% |
| Phynylalanine PHE (F) | 9 | 8.11% |
| Isoleucine ILE (I) | 11 | 9.91% |
| Histidine HIS (H) | 1 | 0.9% |
| Lysine LYS (K) | 9 | 8.11% |
| Methionine MET (M) | 2 | 1.8% |
| Leucine LEU (L) | 12 | 10.81% |
| Asparagine ASN (N) | 4 | 3.6% |
| Glutamine GLN (Q) | 2 | 1.8% |
| Proline PRO (P) | 7 | 6.31% |
| Serine SER (S) | 6 | 5.41% |
| Arginine ARG (R) | 6 | 5.41% |
| Threonine THR (T) | 4 | 3.6% |
| Tryptophan TRP (W) | 1 | 0.9% |
| Valine VAL (V) | 8 | 7.21% |
| Tyrosine TYR (Y) | 1 | 0.9% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 581 |
| Hydrogen | H | 925 |
| Nitrogen | N | 147 |
| Oxygen | O | 157 |
| Sulphur | S | 4 |
| Formula | C581H925N147O157S4 |
| Total Number of Atoms: | 1814 |
| Total number of positively charged residues (ARG + LYS): | 15 |
| Total number of negatively charged residues (ASP + GLU): | 14 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 7115 Absorption 0.1% (=1 g/l) 0.564, assuming all pairs of CYS residues form cystines Ext. coefficient 6990 Absorption 0.1% (=1 g/l) 0.554, assuming all CYS residues are reduced |
| Aromaticity: | 0.099 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 43.44 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [37.84, 20.72, 26.13] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 107.117 |
| Grand average of hydropathicity (GRAVY): | 0.13 |