Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5954 |
| Number of amino acids: | 180 |
| Molecular Weight: | 20026.14 Da |
| Theoretical pI: | 6.15 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 8 | 4.44% |
| Cysteine CYS (C) | 2 | 1.11% |
| Glutamic Acid GLU (E) | 9 | 5% |
| Aspartic Acid ASP (D) | 8 | 4.44% |
| Glycine GLY (G) | 13 | 7.22% |
| Phynylalanine PHE (F) | 7 | 3.89% |
| Isoleucine ILE (I) | 12 | 6.67% |
| Histidine HIS (H) | 12 | 6.67% |
| Lysine LYS (K) | 8 | 4.44% |
| Methionine MET (M) | 11 | 6.11% |
| Leucine LEU (L) | 17 | 9.44% |
| Asparagine ASN (N) | 8 | 4.44% |
| Glutamine GLN (Q) | 1 | 0.56% |
| Proline PRO (P) | 11 | 6.11% |
| Serine SER (S) | 19 | 10.56% |
| Arginine ARG (R) | 4 | 2.22% |
| Threonine THR (T) | 8 | 4.44% |
| Tryptophan TRP (W) | 4 | 2.22% |
| Valine VAL (V) | 14 | 7.78% |
| Tyrosine TYR (Y) | 4 | 2.22% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 900 |
| Hydrogen | H | 1389 |
| Nitrogen | N | 237 |
| Oxygen | O | 255 |
| Sulphur | S | 13 |
| Formula | C900H1389N237O255S13 |
| Total Number of Atoms: | 2794 |
| Total number of positively charged residues (ARG + LYS): | 12 |
| Total number of negatively charged residues (ASP + GLU): | 17 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 28085 Absorption 0.1% (=1 g/l) 1.402, assuming all pairs of CYS residues form cystines Ext. coefficient 27960 Absorption 0.1% (=1 g/l) 1.396, assuming all CYS residues are reduced |
| Aromaticity: | 0.083 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 52.41 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.22, 28.33, 25.00] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 89.8333 |
| Grand average of hydropathicity (GRAVY): | 0.04 |