Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5951 |
| Number of amino acids: | 279 |
| Molecular Weight: | 30038.33 Da |
| Theoretical pI: | 9.23 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 34 | 12.19% |
| Cysteine CYS (C) | 12 | 4.3% |
| Glutamic Acid GLU (E) | 10 | 3.58% |
| Aspartic Acid ASP (D) | 12 | 4.3% |
| Glycine GLY (G) | 28 | 10.04% |
| Phynylalanine PHE (F) | 7 | 2.51% |
| Isoleucine ILE (I) | 5 | 1.79% |
| Histidine HIS (H) | 5 | 1.79% |
| Lysine LYS (K) | 7 | 2.51% |
| Methionine MET (M) | 6 | 2.15% |
| Leucine LEU (L) | 22 | 7.89% |
| Asparagine ASN (N) | 5 | 1.79% |
| Glutamine GLN (Q) | 7 | 2.51% |
| Proline PRO (P) | 12 | 4.3% |
| Serine SER (S) | 23 | 8.24% |
| Arginine ARG (R) | 26 | 9.32% |
| Threonine THR (T) | 16 | 5.73% |
| Tryptophan TRP (W) | 6 | 2.15% |
| Valine VAL (V) | 26 | 9.32% |
| Tyrosine TYR (Y) | 10 | 3.58% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1309 |
| Hydrogen | H | 2072 |
| Nitrogen | N | 392 |
| Oxygen | O | 385 |
| Sulphur | S | 18 |
| Formula | C1309H2072N392O385S18 |
| Total Number of Atoms: | 4176 |
| Total number of positively charged residues (ARG + LYS): | 33 |
| Total number of negatively charged residues (ASP + GLU): | 22 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 48650 Absorption 0.1% (=1 g/l) 1.620, assuming all pairs of CYS residues form cystines Ext. coefficient 47900 Absorption 0.1% (=1 g/l) 1.595, assuming all CYS residues are reduced |
| Aromaticity: | 0.082 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 32.24 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [27.24, 24.37, 25.81] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 76.9534 |
| Grand average of hydropathicity (GRAVY): | -0.07 |