Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5949 |
| Number of amino acids: | 248 |
| Molecular Weight: | 26629.09 Da |
| Theoretical pI: | 8.55 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 27 | 10.89% |
| Cysteine CYS (C) | 9 | 3.63% |
| Glutamic Acid GLU (E) | 2 | 0.81% |
| Aspartic Acid ASP (D) | 10 | 4.03% |
| Glycine GLY (G) | 25 | 10.08% |
| Phynylalanine PHE (F) | 10 | 4.03% |
| Isoleucine ILE (I) | 11 | 4.44% |
| Histidine HIS (H) | 1 | 0.4% |
| Lysine LYS (K) | 10 | 4.03% |
| Methionine MET (M) | 7 | 2.82% |
| Leucine LEU (L) | 13 | 5.24% |
| Asparagine ASN (N) | 19 | 7.66% |
| Glutamine GLN (Q) | 11 | 4.44% |
| Proline PRO (P) | 11 | 4.44% |
| Serine SER (S) | 20 | 8.06% |
| Arginine ARG (R) | 6 | 2.42% |
| Threonine THR (T) | 20 | 8.06% |
| Tryptophan TRP (W) | 9 | 3.63% |
| Valine VAL (V) | 16 | 6.45% |
| Tyrosine TYR (Y) | 11 | 4.44% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1183 |
| Hydrogen | H | 1789 |
| Nitrogen | N | 317 |
| Oxygen | O | 354 |
| Sulphur | S | 16 |
| Formula | C1183H1789N317O354S16 |
| Total Number of Atoms: | 3659 |
| Total number of positively charged residues (ARG + LYS): | 16 |
| Total number of negatively charged residues (ASP + GLU): | 12 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 66390 Absorption 0.1% (=1 g/l) 2.493, assuming all pairs of CYS residues form cystines Ext. coefficient 65890 Absorption 0.1% (=1 g/l) 2.474, assuming all CYS residues are reduced |
| Aromaticity: | 0.121 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 34.95 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.23, 30.24, 19.76] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 67.3387 |
| Grand average of hydropathicity (GRAVY): | -0.07 |