Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5944 |
| Number of amino acids: | 441 |
| Molecular Weight: | 50279.25 Da |
| Theoretical pI: | 6.16 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 18 | 4.08% |
| Cysteine CYS (C) | 10 | 2.27% |
| Glutamic Acid GLU (E) | 29 | 6.58% |
| Aspartic Acid ASP (D) | 17 | 3.85% |
| Glycine GLY (G) | 34 | 7.71% |
| Phynylalanine PHE (F) | 24 | 5.44% |
| Isoleucine ILE (I) | 32 | 7.26% |
| Histidine HIS (H) | 11 | 2.49% |
| Lysine LYS (K) | 23 | 5.22% |
| Methionine MET (M) | 9 | 2.04% |
| Leucine LEU (L) | 39 | 8.84% |
| Asparagine ASN (N) | 23 | 5.22% |
| Glutamine GLN (Q) | 14 | 3.17% |
| Proline PRO (P) | 25 | 5.67% |
| Serine SER (S) | 37 | 8.39% |
| Arginine ARG (R) | 18 | 4.08% |
| Threonine THR (T) | 23 | 5.22% |
| Tryptophan TRP (W) | 9 | 2.04% |
| Valine VAL (V) | 20 | 4.54% |
| Tyrosine TYR (Y) | 26 | 5.9% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2287 |
| Hydrogen | H | 3454 |
| Nitrogen | N | 586 |
| Oxygen | O | 657 |
| Sulphur | S | 19 |
| Formula | C2287H3454N586O657S19 |
| Total Number of Atoms: | 7003 |
| Total number of positively charged residues (ARG + LYS): | 41 |
| Total number of negatively charged residues (ASP + GLU): | 46 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 88865 Absorption 0.1% (=1 g/l) 1.767, assuming all pairs of CYS residues form cystines Ext. coefficient 88240 Absorption 0.1% (=1 g/l) 1.755, assuming all CYS residues are reduced |
| Aromaticity: | 0.134 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 42.86 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [34.01, 26.98, 21.54] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 80.0227 |
| Grand average of hydropathicity (GRAVY): | -0.27 |