Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5930 |
| Number of amino acids: | 187 |
| Molecular Weight: | 20302.5 Da |
| Theoretical pI: | 9.21 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 7 | 3.74% |
| Cysteine CYS (C) | 4 | 2.14% |
| Glutamic Acid GLU (E) | 8 | 4.28% |
| Aspartic Acid ASP (D) | 3 | 1.6% |
| Glycine GLY (G) | 15 | 8.02% |
| Phynylalanine PHE (F) | 8 | 4.28% |
| Isoleucine ILE (I) | 7 | 3.74% |
| Histidine HIS (H) | 6 | 3.21% |
| Lysine LYS (K) | 14 | 7.49% |
| Methionine MET (M) | 8 | 4.28% |
| Leucine LEU (L) | 21 | 11.23% |
| Asparagine ASN (N) | 11 | 5.88% |
| Glutamine GLN (Q) | 3 | 1.6% |
| Proline PRO (P) | 15 | 8.02% |
| Serine SER (S) | 27 | 14.44% |
| Arginine ARG (R) | 3 | 1.6% |
| Threonine THR (T) | 9 | 4.81% |
| Tryptophan TRP (W) | 3 | 1.6% |
| Valine VAL (V) | 11 | 5.88% |
| Tyrosine TYR (Y) | 4 | 2.14% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 908 |
| Hydrogen | H | 1429 |
| Nitrogen | N | 239 |
| Oxygen | O | 264 |
| Sulphur | S | 12 |
| Formula | C908H1429N239O264S12 |
| Total Number of Atoms: | 2852 |
| Total number of positively charged residues (ARG + LYS): | 17 |
| Total number of negatively charged residues (ASP + GLU): | 11 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 22710 Absorption 0.1% (=1 g/l) 1.119, assuming all pairs of CYS residues form cystines Ext. coefficient 22460 Absorption 0.1% (=1 g/l) 1.106, assuming all CYS residues are reduced |
| Aromaticity: | 0.080 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 51.13 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.88, 36.36, 23.53] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 79.1977 |
| Grand average of hydropathicity (GRAVY): | -0.12 |