Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5898 |
| Number of amino acids: | 261 |
| Molecular Weight: | 29266.85 Da |
| Theoretical pI: | 6.66 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 13 | 4.98% |
| Cysteine CYS (C) | 2 | 0.77% |
| Glutamic Acid GLU (E) | 10 | 3.83% |
| Aspartic Acid ASP (D) | 16 | 6.13% |
| Glycine GLY (G) | 10 | 3.83% |
| Phynylalanine PHE (F) | 21 | 8.05% |
| Isoleucine ILE (I) | 13 | 4.98% |
| Histidine HIS (H) | 6 | 2.3% |
| Lysine LYS (K) | 16 | 6.13% |
| Methionine MET (M) | 2 | 0.77% |
| Leucine LEU (L) | 23 | 8.81% |
| Asparagine ASN (N) | 26 | 9.96% |
| Glutamine GLN (Q) | 8 | 3.07% |
| Proline PRO (P) | 10 | 3.83% |
| Serine SER (S) | 27 | 10.34% |
| Arginine ARG (R) | 9 | 3.45% |
| Threonine THR (T) | 22 | 8.43% |
| Tryptophan TRP (W) | 2 | 0.77% |
| Valine VAL (V) | 20 | 7.66% |
| Tyrosine TYR (Y) | 5 | 1.92% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1310 |
| Hydrogen | H | 2026 |
| Nitrogen | N | 352 |
| Oxygen | O | 402 |
| Sulphur | S | 4 |
| Formula | C1310H2026N352O402S4 |
| Total Number of Atoms: | 4094 |
| Total number of positively charged residues (ARG + LYS): | 25 |
| Total number of negatively charged residues (ASP + GLU): | 26 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 18575 Absorption 0.1% (=1 g/l) 0.635, assuming all pairs of CYS residues form cystines Ext. coefficient 18450 Absorption 0.1% (=1 g/l) 0.630, assuming all CYS residues are reduced |
| Aromaticity: | 0.107 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 27.54 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.18, 27.97, 18.39] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 80.9962 |
| Grand average of hydropathicity (GRAVY): | -0.29 |