Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5880 |
| Number of amino acids: | 213 |
| Molecular Weight: | 21602.89 Da |
| Theoretical pI: | 4.42 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 26 | 12.21% |
| Cysteine CYS (C) | 10 | 4.69% |
| Glutamic Acid GLU (E) | 5 | 2.35% |
| Aspartic Acid ASP (D) | 18 | 8.45% |
| Glycine GLY (G) | 31 | 14.55% |
| Phynylalanine PHE (F) | 6 | 2.82% |
| Isoleucine ILE (I) | 5 | 2.35% |
| Histidine HIS (H) | 3 | 1.41% |
| Lysine LYS (K) | 2 | 0.94% |
| Methionine MET (M) | 5 | 2.35% |
| Leucine LEU (L) | 17 | 7.98% |
| Asparagine ASN (N) | 8 | 3.76% |
| Glutamine GLN (Q) | 7 | 3.29% |
| Proline PRO (P) | 9 | 4.23% |
| Serine SER (S) | 21 | 9.86% |
| Arginine ARG (R) | 10 | 4.69% |
| Threonine THR (T) | 11 | 5.16% |
| Tryptophan TRP (W) | 3 | 1.41% |
| Valine VAL (V) | 13 | 6.1% |
| Tyrosine TYR (Y) | 3 | 1.41% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 912 |
| Hydrogen | H | 1429 |
| Nitrogen | N | 269 |
| Oxygen | O | 310 |
| Sulphur | S | 15 |
| Formula | C912H1429N269O310S15 |
| Total Number of Atoms: | 2935 |
| Total number of positively charged residues (ARG + LYS): | 12 |
| Total number of negatively charged residues (ASP + GLU): | 23 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 21595 Absorption 0.1% (=1 g/l) 1.000, assuming all pairs of CYS residues form cystines Ext. coefficient 20970 Absorption 0.1% (=1 g/l) 0.971, assuming all CYS residues are reduced |
| Aromaticity: | 0.056 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 63.91 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [22.07, 32.39, 24.88] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 70.1878 |
| Grand average of hydropathicity (GRAVY): | -0.06 |