Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5879 |
| Number of amino acids: | 265 |
| Molecular Weight: | 28590.26 Da |
| Theoretical pI: | 5.83 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 21 | 7.92% |
| Cysteine CYS (C) | 7 | 2.64% |
| Glutamic Acid GLU (E) | 19 | 7.17% |
| Aspartic Acid ASP (D) | 19 | 7.17% |
| Glycine GLY (G) | 32 | 12.08% |
| Phynylalanine PHE (F) | 10 | 3.77% |
| Isoleucine ILE (I) | 10 | 3.77% |
| Histidine HIS (H) | 5 | 1.89% |
| Lysine LYS (K) | 27 | 10.19% |
| Methionine MET (M) | 3 | 1.13% |
| Leucine LEU (L) | 15 | 5.66% |
| Asparagine ASN (N) | 6 | 2.26% |
| Glutamine GLN (Q) | 1 | 0.38% |
| Proline PRO (P) | 18 | 6.79% |
| Serine SER (S) | 15 | 5.66% |
| Arginine ARG (R) | 7 | 2.64% |
| Threonine THR (T) | 18 | 6.79% |
| Tryptophan TRP (W) | 6 | 2.26% |
| Valine VAL (V) | 17 | 6.42% |
| Tyrosine TYR (Y) | 9 | 3.4% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1276 |
| Hydrogen | H | 1966 |
| Nitrogen | N | 336 |
| Oxygen | O | 391 |
| Sulphur | S | 10 |
| Formula | C1276H1966N336O391S10 |
| Total Number of Atoms: | 3979 |
| Total number of positively charged residues (ARG + LYS): | 34 |
| Total number of negatively charged residues (ASP + GLU): | 38 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 46785 Absorption 0.1% (=1 g/l) 1.636, assuming all pairs of CYS residues form cystines Ext. coefficient 46410 Absorption 0.1% (=1 g/l) 1.623, assuming all CYS residues are reduced |
| Aromaticity: | 0.094 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 25.21 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [25.28, 26.79, 21.89] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 63.3207 |
| Grand average of hydropathicity (GRAVY): | -0.49 |