Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5851 |
| Number of amino acids: | 247 |
| Molecular Weight: | 26205.14 Da |
| Theoretical pI: | 5.54 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 16 | 6.48% |
| Cysteine CYS (C) | 1 | 0.4% |
| Glutamic Acid GLU (E) | 13 | 5.26% |
| Aspartic Acid ASP (D) | 9 | 3.64% |
| Glycine GLY (G) | 21 | 8.5% |
| Phynylalanine PHE (F) | 7 | 2.83% |
| Isoleucine ILE (I) | 11 | 4.45% |
| Histidine HIS (H) | 1 | 0.4% |
| Lysine LYS (K) | 12 | 4.86% |
| Methionine MET (M) | 6 | 2.43% |
| Leucine LEU (L) | 34 | 13.77% |
| Asparagine ASN (N) | 13 | 5.26% |
| Glutamine GLN (Q) | 11 | 4.45% |
| Proline PRO (P) | 18 | 7.29% |
| Serine SER (S) | 23 | 9.31% |
| Arginine ARG (R) | 8 | 3.24% |
| Threonine THR (T) | 19 | 7.69% |
| Tryptophan TRP (W) | 0 | 0% |
| Valine VAL (V) | 20 | 8.1% |
| Tyrosine TYR (Y) | 4 | 1.62% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1161 |
| Hydrogen | H | 1901 |
| Nitrogen | N | 309 |
| Oxygen | O | 362 |
| Sulphur | S | 7 |
| Formula | C1161H1901N309O362S7 |
| Total Number of Atoms: | 3740 |
| Total number of positively charged residues (ARG + LYS): | 20 |
| Total number of negatively charged residues (ASP + GLU): | 22 |
| Extinction Coefficient: | This protein does not contain any Tryptophan residues. Experience shows that this could result in more than 10% error in the computed extinction coefficient. Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 5960 Absorption 0.1% (=1 g/l) 0.227, assuming all pairs of CYS residues form cystines Ext. coefficient 5960 Absorption 0.1% (=1 g/l) 0.227, assuming all CYS residues are reduced |
| Aromaticity: | 0.045 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 40.36 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.77, 30.36, 27.94] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 101.012 |
| Grand average of hydropathicity (GRAVY): | 0.02 |