Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5841 |
| Number of amino acids: | 189 |
| Molecular Weight: | 20510.65 Da |
| Theoretical pI: | 5.87 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 7 | 3.7% |
| Cysteine CYS (C) | 6 | 3.17% |
| Glutamic Acid GLU (E) | 5 | 2.65% |
| Aspartic Acid ASP (D) | 10 | 5.29% |
| Glycine GLY (G) | 14 | 7.41% |
| Phynylalanine PHE (F) | 11 | 5.82% |
| Isoleucine ILE (I) | 7 | 3.7% |
| Histidine HIS (H) | 3 | 1.59% |
| Lysine LYS (K) | 10 | 5.29% |
| Methionine MET (M) | 3 | 1.59% |
| Leucine LEU (L) | 30 | 15.87% |
| Asparagine ASN (N) | 19 | 10.05% |
| Glutamine GLN (Q) | 3 | 1.59% |
| Proline PRO (P) | 6 | 3.17% |
| Serine SER (S) | 15 | 7.94% |
| Arginine ARG (R) | 3 | 1.59% |
| Threonine THR (T) | 16 | 8.47% |
| Tryptophan TRP (W) | 1 | 0.53% |
| Valine VAL (V) | 17 | 8.99% |
| Tyrosine TYR (Y) | 3 | 1.59% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 917 |
| Hydrogen | H | 1461 |
| Nitrogen | N | 237 |
| Oxygen | O | 276 |
| Sulphur | S | 9 |
| Formula | C917H1461N237O276S9 |
| Total Number of Atoms: | 2900 |
| Total number of positively charged residues (ARG + LYS): | 13 |
| Total number of negatively charged residues (ASP + GLU): | 15 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 10345 Absorption 0.1% (=1 g/l) 0.504, assuming all pairs of CYS residues form cystines Ext. coefficient 9970 Absorption 0.1% (=1 g/l) 0.486, assuming all CYS residues are reduced |
| Aromaticity: | 0.079 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 15.12 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [36.51, 28.57, 23.81] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 106.137 |
| Grand average of hydropathicity (GRAVY): | 0.24 |