Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_5839 |
| Number of amino acids: | 307 |
| Molecular Weight: | 35396.93 Da |
| Theoretical pI: | 8.26 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 12 | 3.91% |
| Cysteine CYS (C) | 6 | 1.95% |
| Glutamic Acid GLU (E) | 5 | 1.63% |
| Aspartic Acid ASP (D) | 1 | 0.33% |
| Glycine GLY (G) | 7 | 2.28% |
| Phynylalanine PHE (F) | 10 | 3.26% |
| Isoleucine ILE (I) | 16 | 5.21% |
| Histidine HIS (H) | 4 | 1.3% |
| Lysine LYS (K) | 2 | 0.65% |
| Methionine MET (M) | 2 | 0.65% |
| Leucine LEU (L) | 25 | 8.14% |
| Asparagine ASN (N) | 6 | 1.95% |
| Glutamine GLN (Q) | 105 | 34.2% |
| Proline PRO (P) | 48 | 15.64% |
| Serine SER (S) | 16 | 5.21% |
| Arginine ARG (R) | 6 | 1.95% |
| Threonine THR (T) | 7 | 2.28% |
| Tryptophan TRP (W) | 1 | 0.33% |
| Valine VAL (V) | 16 | 5.21% |
| Tyrosine TYR (Y) | 12 | 3.91% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1579 |
| Hydrogen | H | 2439 |
| Nitrogen | N | 447 |
| Oxygen | O | 466 |
| Sulphur | S | 8 |
| Formula | C1579H2439N447O466S8 |
| Total Number of Atoms: | 4939 |
| Total number of positively charged residues (ARG + LYS): | 8 |
| Total number of negatively charged residues (ASP + GLU): | 6 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 23755 Absorption 0.1% (=1 g/l) 0.671, assuming all pairs of CYS residues form cystines Ext. coefficient 23380 Absorption 0.1% (=1 g/l) 0.661, assuming all CYS residues are reduced |
| Aromaticity: | 0.075 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 114.63 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [26.06, 25.08, 14.33] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 71.1075 |
| Grand average of hydropathicity (GRAVY): | -0.87 |